ncRNA ID | novel_gma_miR3797 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:55036014-55036094 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 62 - UUGGUUAUAGACAAAAUGAA - 81 |
Stem-loop(if miRNA) |
--U                  AG   AUG   -    C  UC    UGGUUAUAGACAAAAUGA  UUU   UUG GAGU GU  U    ||||||||||||||||||  |||   ||| |||| ||    ACCAAUAUCUGUUUUACU  AAA   AAC CUUA CA  A GGC                  AA   --A   U    U  UC |
Stem-loop sequence | UUGGUUAUAGACAAAAUGAAGUUUAUGUUGGAGUCGUUCUACUACUAUUCUCAAAAAAAAUCAUUUUGUCUAUAACCACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003552514.3 |
|
1.0 | PREDICTED: Glycine max UDP-glycosyltransferase 83A1-like (LOC100805563), mRNA | UDP-glycosyltransferase 83A1-like(LOC100805563) | coding protein | psRNATarget | |||||||||
XM_003546387.3 |
|
3.0 | PREDICTED: Glycine max DNA ligase 4 (LOC100816002), mRNA | DNA ligase 4(LOC100816002) | coding protein | psRNATarget |