ncRNA ID | novel_gma_miR3792 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:1794011-1794057 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AAAUUAAAAUUAGUCCUUUG - 20 |
Stem-loop(if miRNA) |
-AAAUUAAA          UG  G          AUUAGUCCUU  AU A          ||||||||||  ||          UAGUUAGGAG  UG A UGUUUAUAC          --  A |
Stem-loop sequence | AAAUUAAAAUUAGUCCUUUGAUGAAAGUGAGGAUUGAUCAUAUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532593.3 |
|
2.5 | PREDICTED: Glycine max reticuline oxidase-like protein (LOC100812087), mRNA | reticuline oxidase-like protein(LOC100812087) | coding protein | psRNATarget | |||||||||
XM_003519791.3 |
|
3.0 | PREDICTED: Glycine max zinc-finger homeodomain protein 1-like (LOC100808910), mRNA | zinc-finger homeodomain protein 1-like(LOC100808910) | coding protein | psRNATarget |