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BaseInfo

ncRNA ID novel_gma_miR3792
Species Glycine max
Class miRNA
Genome position Chr17:1794011-1794057 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - AAAUUAAAAUUAGUCCUUUG - 20
Stem-loop(if miRNA) -AAAUUAAA          UG  G
         AUUAGUCCUU  AU A
         ||||||||||  ||
         UAGUUAGGAG  UG A
UGUUUAUAC          --  A
Stem-loop sequence AAAUUAAAAUUAGUCCUUUGAUGAAAGUGAGGAUUGAUCAUAUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532593.3
ncRNA:20   GUUUCCUGAUUAAAAUUAAA   1
  |||=||||||*|||||||||
targets:1841   CAAGGGACUAUUUUUAAUUU   1860

2.5 PREDICTED: Glycine max reticuline oxidase-like protein (LOC100812087), mRNA reticuline oxidase-like protein(LOC100812087) coding protein psRNATarget
XM_003519791.3
ncRNA:20   GUUUCCUGAUUAAAAUUAAA   1
  ==**||||||||||||||||
targets:1086   UGCUGGACUAAUUUUAAUUU   1105

3.0 PREDICTED: Glycine max zinc-finger homeodomain protein 1-like (LOC100808910), mRNA zinc-finger homeodomain protein 1-like(LOC100808910) coding protein psRNATarget