| ncRNA ID | novel_gma_miR3778 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr17:12291091-12291194 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1451676 |
| Length | 19 |
| Mature sequence(if miRNA) | 1 - CAUUUUGUCUGGAUUUCAA - 19 |
| Stem-loop(if miRNA) |
-- - CG UCGA CG CA UC UUUU UU GGAGUUC GACA GUGA GGAU CGGUG GCUU CUAU GC C ||||||| |||| |||| |||| ||||| |||| |||| || CUUUAGG CUGU UACU UUUA GUCAC UGAG GGUG UG U AA U UU UUAC AU -A UU ---- UU |
| Stem-loop sequence | GGAGUUCGACACGGUGAUCGAGGAUCGCGGUGCAGCUUUCCUAUUUUUGCUUCUUUGUGUGGUUGAGUACACUGUAAUUUCAUUUCAUUUUGUCUGGAUUUCAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006583309.2 |
|
2.0 | PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100777313), transcript variant X2, mRNA | glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100777313) | coding protein | psRNATarget | |||||||||
| XM_003528851.3 |
|
2.0 | PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100777313), transcript variant X1, mRNA | glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100777313) | coding protein | psRNATarget |