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BaseInfo

ncRNA ID novel_gma_miR3774
Species Glycine max
Class miRNA
Genome position Chr17:40650754-40650796 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 24 - GUGUUUGUUGUUGAAUCGUG - 43
Stem-loop(if miRNA) --     U   G     U   G
  GUGUU GUU UUGAA CGU A
  ||||| ||| ||||| |||
  CAUGA CAA GACUU GUA A
AG     C   A     -   A
Stem-loop sequence GUGUUUGUUGUUGAAUCGUGAAAAUGUUCAGAAACCAGUACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014761977.1
ncRNA:20   GUGCUAAGUUGUUGUUUGUG   1
  =|=*|||||||||||||||*
targets:621   UAUUAUUCAACAACAAACAG   640

3.0 PREDICTED: Glycine max methylthioribose-1-phosphate isomerase-like (LOC100799311), mRNA methylthioribose-1-phosphate isomerase-like(LOC100799311) coding protein psRNATarget
XM_003531308.3
ncRNA:20   GUGCUAAGUUGUUGUUUGUG   1
  |||||**||||||||||||*
targets:907   CACGACGCAACAACAAACAA   926

3.0 PREDICTED: Glycine max uncharacterized LOC100817236 (LOC100817236), mRNA uncharacterized LOC100817236(LOC100817236) coding protein psRNATarget