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BaseInfo

ncRNA ID	novel_gma_miR3773
Species	Glycine max
Class	miRNA
Genome position	Chr16:32619205-32619270 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - CUGUAGAAAAUUGUCACCUC - 20
Stem-loop(if miRNA)	-GA   -      GA  A  U    UCUGUCCA    GUG CAAUUU  UA AG GGUG        G    ||| ||||||  || || ||||    CAC GUUAAA  AU UC CUAC        U CUC   U      AG  G  U    CCUUUUAA
Stem-loop sequence	GAGUGCAAUUUGAUAAAGUGGUGUCUGUCCAGUAAUUUUCCCAUCUCUGUAGAAAAUUGUCACCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT098322.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   |||||||||||||||||||| targets:330   GAGGUGACAAUUUUCUACAG   349 Target Full Sequence	0.0	Soybean clone JCVI-FLGm-23G11 unknown mRNA	NA	coding protein	psRNATarget
XM_014769087.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1036   AAGGUGACAAUAUUCUACAC   1055 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100789257), transcript variant X5, mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100789257)	coding protein	psRNATarget
AK245166.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1362   AAGGUGACAAUAUUCUACAC   1381 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-22-L05	NA	coding protein	psRNATarget
XM_003553274.3	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1450   AAGGUGACAAUAUUCUACAC   1469 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100808939), mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100808939)	coding protein	psRNATarget
XM_014769086.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1416   AAGGUGACAAUAUUCUACAC   1435 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100789257), transcript variant X4, mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100789257)	coding protein	psRNATarget
XM_003548434.3	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1508   AAGGUGACAAUAUUCUACAC   1527 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100789257), transcript variant X3, mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100789257)	coding protein	psRNATarget
XM_014769084.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:1778   AAGGUGACAAUAUUCUACAC   1797 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100789257), transcript variant X1, mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100789257)	coding protein	psRNATarget
XM_014769085.1	ncRNA:20   CUCCACUGUUAAAAGAUGUC   1   *||||||||||*|||||||* targets:2378   AAGGUGACAAUAUUCUACAC   2397 Target Full Sequence	2.5	PREDICTED: Glycine max acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal (LOC100789257), transcript variant X2, mRNA	acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal(LOC100789257)	coding protein	psRNATarget