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BaseInfo

ncRNA ID	novel_gma_miR3770
Species	Glycine max
Class	miRNA
Genome position	Chr16:30172559-30172614 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	37 - AUACAAAACAUAAACACAUU - 56
Stem-loop(if miRNA)	--        CA         UU   CU   UGUGUUUG  UUUUGUAUU  GAA  U   ||||||||  |||||||||  |||  G   ACACAAAU  AAAACAUAA  CUU  C UU        AC         -C   UA
Stem-loop sequence	UGUGUUUGCAUUUUGUAUUUUGAACUUGCAUUUCCAAUACAAAACAUAAACACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003542984.3	ncRNA:20   UUACACAAAUACAAAACAUA   1   =|||**|||||||||||||| targets:634   GAUGGAUUUAUGUUUUGUAU   653 Target Full Sequence	2.0	PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like (LOC100797119), transcript variant X2, mRNA	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like(LOC100797119)	coding protein	psRNATarget
XM_003542983.3	ncRNA:20   UUACACAAAUACAAAACAUA   1   =|||**|||||||||||||| targets:549   GAUGGAUUUAUGUUUUGUAU   568 Target Full Sequence	2.0	PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like (LOC100797119), transcript variant X3, mRNA	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like(LOC100797119)	coding protein	psRNATarget
NM_001250082.2	ncRNA:20   UUACACAAAUACAAAACAUA   1   **||||||||||||||||=| targets:1005   UCUGUGUUUAUGUUUUGUGU   1024 Target Full Sequence	2.5	Glycine max bZIP transcription factor bZIP59 (BZIP59), mRNA	bZIP transcription factor bZIP59(BZIP59)	coding protein	psRNATarget
BT097364.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   **||||||||||||||||=| targets:988   UCUGUGUUUAUGUUUUGUGU   1007 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-21N16 unknown mRNA	NA	coding protein	psRNATarget
DQ787037.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   **||||||||||||||||=| targets:915   UCUGUGUUUAUGUUUUGUGU   934 Target Full Sequence	2.5	Glycine max bZIP transcription factor bZIP59 (bZIP59) mRNA, complete cds	NA	coding protein	psRNATarget
XM_006586852.2	ncRNA:20   UUACACAAAUACAAAACAUA   1   |||||||||*|||||||||* targets:782   AAUGUGUUUUUGUUUUGUAG   801 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102670271 (LOC102670271), mRNA	uncharacterized LOC102670271(LOC102670271)	coding protein	psRNATarget
XM_003539633.3	ncRNA:20   UUACACAAAUACAAAACAUA   1   **||||||||||||||||*| targets:1440   UUUGUGUUUAUGUUUUGUUU   1459 Target Full Sequence	2.5	PREDICTED: Glycine max dof zinc finger protein DOF3.6 (LOC100816635), mRNA	dof zinc finger protein DOF3.6(LOC100816635)	coding protein	psRNATarget
NM_001352889.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   =*||||||*||||||||||| targets:1476   GCUGUGUUAAUGUUUUGUAU   1495 Target Full Sequence	2.5	Glycine max beta-cyanoalanine synthase (LOC100806420), mRNA	NA	coding protein	psRNATarget
XM_014765423.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   |||*||*||||||||||||* targets:2866   AAUAUGCUUAUGUUUUGUAA   2885 Target Full Sequence	3.0	PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X9, mRNA	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277)	coding protein	psRNATarget
XM_014765424.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   |||*||*||||||||||||* targets:2866   AAUAUGCUUAUGUUUUGUAA   2885 Target Full Sequence	3.0	PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X10, mRNA	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277)	coding protein	psRNATarget
XM_014765425.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   |||*||*||||||||||||* targets:2866   AAUAUGCUUAUGUUUUGUAA   2885 Target Full Sequence	3.0	PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X11, mRNA	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277)	coding protein	psRNATarget
XM_014767621.1	ncRNA:20   UUACACAAAUACAAAACAUA   1   |||*||*||||||||||||* targets:1698   AAUAUGCUUAUGUUUUGUAA   1717 Target Full Sequence	3.0	PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC102668814), transcript variant X35, mRNA	lysine-specific demethylase JMJ25-like(LOC102668814)	coding protein	psRNATarget