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BaseInfo

ncRNA ID novel_gma_miR3768
Species Glycine max
Class miRNA
Genome position Chr16:24549030-24549071 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - AGAAUAAAAAGAGAAGAUCU - 20
Stem-loop(if miRNA) --  A     AAG        U
  AG AUAAA   AGAAGAUC G
  || |||||   ||||||||
  UC UAUUU   UUUUUUGG U
UU  A     --A        U
Stem-loop sequence AGAAUAAAAAGAGAAGAUCUGUUGGUUUUUUAUUUAUACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549902.3
ncRNA:20   UCUAGAAGAGAAAAAUAAGA   1
  =*||||||||||||||||=|
targets:1056   GUAUCUUCUCUUUUUAUUUU   1075

2.5 PREDICTED: Glycine max uncharacterized LOC100781097 (LOC100781097), mRNA uncharacterized LOC100781097(LOC100781097) coding protein psRNATarget
XM_003526475.3
ncRNA:20   UCUAGAAGAGAAAAAUAAGA   1
  |*||||||||||||||*|||
targets:228   AUAUCUUCUCUUUUUAAUCU   247

2.5 PREDICTED: Glycine max uncharacterized LOC100811495 (LOC100811495), mRNA uncharacterized LOC100811495(LOC100811495) coding protein psRNATarget
XM_003535826.3
ncRNA:20   UCUAGAAGAGAAAAAUAAGA   1
  |*|||||||||*||||||||
targets:2741   AAAUCUUCUCUCUUUAUUCU   2760

2.5 PREDICTED: Glycine max exocyst complex component SEC15A-like (LOC100778087), mRNA exocyst complex component SEC15A-like(LOC100778087) coding protein psRNATarget