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BaseInfo

ncRNA ID novel_gma_miR3767
Species Glycine max
Class miRNA
Genome position Chr16:13911980-13912083 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - CUUGAUGCUGGUGUUUUUAG - 20
Stem-loop(if miRNA) --CU   U  UG         G CA   UUCC   U  UUCAUAUUU       
    UGA GC  GUGUUUUUA U  AGG    CGU GU         UACAAUUU
    ||| ||  ||||||||| |  |||    ||| ||         |||||||C
    ACU UG  UAUAAAAGU A  UCC    GUA CA         GUGUUAGA
UGUU   -  GU         G --   UUAC   C  --UUUCCCU       
Stem-loop sequence CUUGAUGCUGGUGUUUUUAGUCAAGGUUCCCGUUGUUUCAUAUUUUACAAUUUCAGAUUGUGUCCCUUUACCAUGCAUUCCUAGUGAAAAUAUUGGUUCAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006595732.2
ncRNA:20   GAUUUUUGUGGUCGUAGUUC   1
  =||||||||=|||||||||*
targets:428   UUAAAAACAUCAGCAUCAAA   447

2.5 PREDICTED: Glycine max protein kinase 2A, chloroplastic-like (LOC102664409), mRNA protein kinase 2A, chloroplastic-like(LOC102664409) coding protein psRNATarget