ncRNA ID | novel_gma_miR3767 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:13911980-13912083 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUUGAUGCUGGUGUUUUUAG - 20 |
Stem-loop(if miRNA) |
--CU   U  UG         G CA   UUCC   U  UUCAUAUUU            UGA GC  GUGUUUUUA U  AGG    CGU GU         UACAAUUU     ||| ||  ||||||||| |  |||    ||| ||         |||||||C     ACU UG  UAUAAAAGU A  UCC    GUA CA         GUGUUAGA UGUU   -  GU         G --   UUAC   C  --UUUCCCU        |
Stem-loop sequence | CUUGAUGCUGGUGUUUUUAGUCAAGGUUCCCGUUGUUUCAUAUUUUACAAUUUCAGAUUGUGUCCCUUUACCAUGCAUUCCUAGUGAAAAUAUUGGUUCAUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006595732.2 |
|
2.5 | PREDICTED: Glycine max protein kinase 2A, chloroplastic-like (LOC102664409), mRNA | protein kinase 2A, chloroplastic-like(LOC102664409) | coding protein | psRNATarget |