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BaseInfo

ncRNA ID	novel_gma_miR3761
Species	Glycine max
Class	miRNA
Genome position	Chr16:3570287-3570470 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - ACUUCAACAUGUCUUAUUUU - 20
Stem-loop(if miRNA)	--                         CA                                  A         --------    -         C   AAUGGGGCAUGUUGAAGUCCCACAU  AAUAAAGAUAGUGCCGAGAUAAACUAUAUAAGUG GGAGCAAUC        CUCA CCUUACAAG C   |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||        |||| ||||||||| G   UUAUUCUGUACAACUUCAGGGUGUA  UUAUUUCUAUCAUGGCUUUAUUUGAUAUAUUCAC CCUCGUUAG        GAGU GGGAUGUUU A UU                         AC                                  C         UCCGAAUU    U         U
Stem-loop sequence	AAUGGGGCAUGUUGAAGUCCCACAUCAAAUAAAGAUAGUGCCGAGAUAAACUAUAUAAGUGAGGAGCAAUCCUCACCUUACAAGCCGAUUUUGUAGGGUUGAGUUAAGCCUGAUUGCUCCCCACUUAUAUAGUUUAUUUCGGUACUAUCUUUAUUCAAUGUGGGACUUCAACAUGUCUUAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092796.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   =|||*|||||||||||||*| targets:517   GAAAGAAGACAUGUUGAAAU   536 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-11D6 unknown mRNA	NA	coding protein	psRNATarget
BT089653.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   =|||*|||||||||||||*| targets:562   GAAAGAAGACAUGUUGAAAU   581 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-2D7 unknown mRNA	NA	coding protein	psRNATarget
XM_003554359.3	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   =|||*|||||||||||||*| targets:596   GAAAGAAGACAUGUUGAAAU   615 Target Full Sequence	2.5	PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 1-like (LOC100779019), mRNA	vacuolar protein-sorting-associated protein 37 homolog 1-like(LOC100779019)	coding protein	psRNATarget
NM_001250716.2	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   =|||*|||||||||||||*| targets:573   GAAAGAAGACAUGUUGAAAU   592 Target Full Sequence	2.5	Glycine max modifier of rudimentary (Mod(r))-like protein (LOC100305851), mRNA	uncharacterized LOC100305851(LOC100305851)	coding protein	psRNATarget
XM_014777796.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6876   AAAGUAUGACAUGUUGAAGC   6895 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X8, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_006583210.2	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6882   AAAGUAUGACAUGUUGAAGC   6901 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X9, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777793.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6888   AAAGUAUGACAUGUUGAAGC   6907 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X5, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777795.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6888   AAAGUAUGACAUGUUGAAGC   6907 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X7, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777790.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6900   AAAGUAUGACAUGUUGAAGC   6919 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X2, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777794.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6956   AAAGUAUGACAUGUUGAAGC   6975 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X6, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777792.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6968   AAAGUAUGACAUGUUGAAGC   6987 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X4, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_014777791.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6968   AAAGUAUGACAUGUUGAAGC   6987 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X3, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_006583209.2	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6980   AAAGUAUGACAUGUUGAAGC   6999 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100783381 (LOC100783381), transcript variant X1, mRNA	uncharacterized LOC100783381(LOC100783381)	coding protein	psRNATarget
XM_006583211.2	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6945   AAAGUAUGACAUGUUGAAGC   6964 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100782848 (LOC100782848), mRNA	uncharacterized LOC100782848(LOC100782848)	coding protein	psRNATarget
XM_014777797.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6748   AAAGUAUGACAUGUUGAAGC   6767 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100810455 (LOC100810455), transcript variant X2, mRNA	uncharacterized LOC100810455(LOC100810455)	coding protein	psRNATarget
XM_006583213.2	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6856   AAAGUAUGACAUGUUGAAGC   6875 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100810455 (LOC100810455), transcript variant X1, mRNA	uncharacterized LOC100810455(LOC100810455)	coding protein	psRNATarget
XM_014777774.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7165   AAAGUAUGACAUGUUGAAGC   7184 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X12, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777770.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:6959   AAAGUAUGACAUGUUGAAGC   6978 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X7, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777768.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7088   AAAGUAUGACAUGUUGAAGC   7107 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X5, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777772.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7159   AAAGUAUGACAUGUUGAAGC   7178 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X10, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_003528777.3	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7182   AAAGUAUGACAUGUUGAAGC   7201 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X9, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777773.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7164   AAAGUAUGACAUGUUGAAGC   7183 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X11, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777765.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7253   AAAGUAUGACAUGUUGAAGC   7272 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X2, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777767.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7262   AAAGUAUGACAUGUUGAAGC   7281 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X4, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777764.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7265   AAAGUAUGACAUGUUGAAGC   7284 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X1, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777766.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7268   AAAGUAUGACAUGUUGAAGC   7287 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X3, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget
XM_014777769.1	ncRNA:20   UUUUAUUCUGUACAACUUCA   1   |||=||*||||||||||||* targets:7336   AAAGUAUGACAUGUUGAAGC   7355 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100780862 (LOC100780862), transcript variant X6, mRNA	uncharacterized LOC100780862(LOC100780862)	coding protein	psRNATarget