Search result

BaseInfo

ncRNA ID	novel_gma_miR3759
Species	Glycine max
Class	miRNA
Genome position	Chr16:6878099-6878152 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - UUGGAAGGAAAGGUGAGAGC - 20
Stem-loop(if miRNA)	--     A     GA      A   UG   UCUCG UUUUC  UUUCGA GUU  A   ||||| |||||  |||||| |||  U   AGAGU GAAAG  AAGGUU CAA  A CG     G     -G      G   CG
Stem-loop sequence	UCUCGAUUUUCGAUUUCGAAGUUUGAUAGCAACGUUGGAAGGAAAGGUGAGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT090294.1	ncRNA:20   CGAGAGUGGAAAGGAAGGUU   1   *||||=|||||||||||||* targets:76   ACUCUUACCUUUCCUUCCAU   95 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-4I21 unknown mRNA	NA	coding protein	psRNATarget
AK286292.1	ncRNA:20   CGAGAGUGGAAAGGAAGGUU   1   *||||=|||||||||||||* targets:78   ACUCUUACCUUUCCUUCCAU   97 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-25-J19	NA	coding protein	psRNATarget
NM_001249314.2	ncRNA:20   CGAGAGUGGAAAGGAAGGUU   1   *||||=|||||||||||||* targets:74   ACUCUUACCUUUCCUUCCAU   93 Target Full Sequence	2.0	Glycine max uncharacterized LOC100306266 (LOC100306266), mRNA	uncharacterized LOC100306266(LOC100306266)	coding protein	psRNATarget
XM_006573425.2	ncRNA:20   CGAGAGUGGAAAGGAAGGUU   1   ||||*|||||||=||||||| targets:456   GCUCGCACCUUUUCUUCCAA   475 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666803 (LOC102666803), mRNA	uncharacterized LOC102666803(LOC102666803)	coding protein	psRNATarget