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BaseInfo

ncRNA ID novel_gma_miR3753
Species Glycine max
Class miRNA
Genome position Chr15:48378847-48378918 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - AUUGUAUGUAUACUCUCAUUU - 21
Stem-loop(if miRNA) --     AUG    - UC     -UGUCAC    CCU
  AUUGU   UAUA C  UCAUU       ACUC   C
  |||||   |||| |  |||||       ||||   A
  UAAUA   AUAU G  AGUAA       UGAG   G
CA     -AA    U UU     CUUACUC    CUU
Stem-loop sequence AUUGUAUGUAUACUCUCAUUUGUCACACUCCCUCAGUUCGAGUCUCAUUCAAUGAUUGUUAUAAAAUAAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588504.2
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1470   UGAUGAAAGUAUACAUACAAU   1490

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X6, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_003535879.3
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1463   UGAUGAAAGUAUACAUACAAU   1483

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X4, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588501.2
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1466   UGAUGAAAGUAUACAUACAAU   1486

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X2, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588502.2
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1466   UGAUGAAAGUAUACAUACAAU   1486

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X3, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588500.2
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1469   UGAUGAAAGUAUACAUACAAU   1489

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X1, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588503.2
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*||||||||||||||
targets:1486   UGAUGAAAGUAUACAUACAAU   1506

1.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X5, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_003519697.3
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *==|||*||||||||||||||
targets:1481   UGGUGAAAGUAUACAUACAAU   1501

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X2, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100795451) coding protein psRNATarget
XM_014764208.1
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *==|||*||||||||||||||
targets:1484   UGGUGAAAGUAUACAUACAAU   1504

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X1, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100795451) coding protein psRNATarget
XM_003522773.3
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*|||||||*||||||
targets:595   UGAUGAAAGUAUACUUACAAU   615

2.5 PREDICTED: Glycine max glycerophosphodiester phosphodiesterase GDPD4-like (LOC100786146), transcript variant X2, mRNA glycerophosphodiester phosphodiesterase GDPD4-like(LOC100786146) coding protein psRNATarget
XM_014774603.1
ncRNA:21   UUUACUCUCAUAUGUAUGUUA   1
  *=||||*|||||||*||||||
targets:595   UGAUGAAAGUAUACUUACAAU   615

2.5 PREDICTED: Glycine max glycerophosphodiester phosphodiesterase GDPD4-like (LOC100786146), transcript variant X1, mRNA glycerophosphodiester phosphodiesterase GDPD4-like(LOC100786146) coding protein psRNATarget
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