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BaseInfo

ncRNA ID	novel_gma_miR3752
Species	Glycine max
Class	miRNA
Genome position	Chr15:43244953-43245065 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	21
Mature sequence(if miRNA)	1 - UUUGUUUUCCUCUGAUUUUUU - 21
Stem-loop(if miRNA)	--   G         -GA            CU   UAAA  A  -   AAAAAA    AAAC   UUU UUUUCCUCU   UUUUUUCUCUUC  AUU    AC CA CAA      AUCA    C   ||| |||||||||   ||||||||||||  |||    || || |||      ||||   AGA AAAAGGAGA   AAAAAAGAGAAG  UAA    UG GU GUU      UAGU    C UA   G         AAA            -U   ----  -  A   ---ACA    AAGG
Stem-loop sequence	UUUGUUUUCCUCUGAUUUUUUCUCUUCCUAUUUAAAACACACAAAAAAAAAUCAAAACCCGGAAUGAUACAUUGAUGGUAAUUGAAGAGAAAAAAAAAAGAGGAAAAGAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003542488.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||||||*||||||||||| targets:4898   AAAAAAUCAAAGGAAAACAAA   4918 Target Full Sequence	1.5	PREDICTED: Glycine max ethylene-insensitive protein 2-like (LOC100801190), mRNA	ethylene-insensitive protein 2-like(LOC100801190)	coding protein	psRNATarget
XM_003536524.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   ||=|||||||||||||||||= targets:346   AAGAAAUCAGAGGAAAACAAG   366 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100800755 (LOC100800755), mRNA	uncharacterized LOC100800755(LOC100800755)	coding protein	psRNATarget
XM_003523365.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   *||||||*||||||||||||* targets:3014   UAAAAAUGAGAGGAAAACAAU   3034 Target Full Sequence	2.0	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial (LOC100790756), mRNA	putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial(LOC100790756)	coding protein	psRNATarget
XM_003519037.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   *|=||||||||||||||=||| targets:1789   UAGAAAUCAGAGGAAAAUAAA   1809 Target Full Sequence	2.5	PREDICTED: Glycine max AP2-like ethylene-responsive transcription factor At2g41710 (LOC100795084), mRNA	AP2-like ethylene-responsive transcription factor At2g41710(LOC100795084)	coding protein	psRNATarget
XM_006606456.2	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1294   AAAAAGUCAGAGGAAAAGAAA   1314 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X6, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_006606453.2	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1310   AAAAAGUCAGAGGAAAAGAAA   1330 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X2, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_014772792.1	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1320   AAAAAGUCAGAGGAAAAGAAA   1340 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X4, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_006606455.2	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1457   AAAAAGUCAGAGGAAAAGAAA   1477 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X5, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_014772791.1	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1456   AAAAAGUCAGAGGAAAAGAAA   1476 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X3, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_014772790.1	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   |||||=|||||||||||*||| targets:1458   AAAAAGUCAGAGGAAAAGAAA   1478 Target Full Sequence	2.5	PREDICTED: Glycine max protein ALWAYS EARLY 2-like (LOC100789533), transcript variant X1, mRNA	protein ALWAYS EARLY 2-like(LOC100789533)	coding protein	psRNATarget
XM_003545094.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   =||||=||||||*|||||||| targets:1290   GAAAAGUCAGAGCAAAACAAA   1310 Target Full Sequence	2.5	PREDICTED: Glycine max glycerol-3-phosphate acyltransferase 1-like (LOC100803875), mRNA	glycerol-3-phosphate acyltransferase 1-like(LOC100803875)	coding protein	psRNATarget
XM_003539025.3	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   *=|||*|||||||||||||=| targets:681   UGAAAUUCAGAGGAAAACAGA   701 Target Full Sequence	2.5	PREDICTED: Glycine max serine/arginine repetitive matrix protein 1-like (LOC100790051), transcript variant X3, mRNA	serine/arginine repetitive matrix protein 1-like(LOC100790051)	coding protein	psRNATarget
XM_006603585.2	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   =**==|||||||||||||||| targets:724   GUUGGAUCAGAGGAAAACAAA   744 Target Full Sequence	3.0	PREDICTED: Glycine max serine/threonine protein kinase-like protein (LOC100499647), transcript variant X1, mRNA	serine/threonine protein kinase-like protein(LOC100499647)	coding protein	psRNATarget
XM_014771321.1	ncRNA:21   UUUUUUAGUCUCCUUUUGUUU   1   =**==|||||||||||||||| targets:606   GUUGGAUCAGAGGAAAACAAA   626 Target Full Sequence	3.0	PREDICTED: Glycine max serine/threonine protein kinase-like protein (LOC100499647), transcript variant X2, mRNA	serine/threonine protein kinase-like protein(LOC100499647)	coding protein	psRNATarget