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BaseInfo

ncRNA ID	novel_gma_miR3748
Species	Glycine max
Class	miRNA
Genome position	Chr15:1948890-1949002 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - UUGAAGUUCUGAAAAAAAAA - 20
Stem-loop(if miRNA)	--           -AAA     A    -   UCAUCAUGUACAGGCUGAUUAUGUGU   UUGAAGUUCUG    AAAAA GUAU AUG                          G   |||||||||||    ||||| |||| |||                          U   GAUUUUAAGAU    UUUUU ACUG UAC                          G UG           GUUG     C    U   AGACACAUGAAUCGAAGACUGGCAAA
Stem-loop sequence	UUGAAGUUCUGAAAAAAAAAGUAUAUGUCAUCAUGUACAGGCUGAUUAUGUGUGUGAAACGGUCAGAAGCUAAGUACACAGACAUUGUCACUUUUUGUUGUAGAAUUUUAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006590340.2	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   |||||||||||||=|||||* targets:4365   UUUUUUUUUCAGAGCUUCAU   4384 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100801863 (LOC100801863), transcript variant X2, mRNA	uncharacterized LOC100801863(LOC100801863)	coding protein	psRNATarget
XM_006590339.2	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   |||||||||||||=|||||* targets:4381   UUUUUUUUUCAGAGCUUCAU   4400 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100801863 (LOC100801863), transcript variant X1, mRNA	uncharacterized LOC100801863(LOC100801863)	coding protein	psRNATarget
XM_003516712.3	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   *||||||||||||=|||||* targets:4391   GUUUUUUUUCAGAGCUUCAU   4410 Target Full Sequence	2.5	PREDICTED: Glycine max increased DNA methylation 1-like (LOC100814247), transcript variant X2, mRNA	increased DNA methylation 1-like(LOC100814247)	coding protein	psRNATarget
XM_014777426.1	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   *||||||||||||=|||||* targets:4408   GUUUUUUUUCAGAGCUUCAU   4427 Target Full Sequence	2.5	PREDICTED: Glycine max increased DNA methylation 1-like (LOC100814247), transcript variant X1, mRNA	increased DNA methylation 1-like(LOC100814247)	coding protein	psRNATarget
XM_014763155.1	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   *|*||||||=|||||||||| targets:4874   AUAUUUUUUUAGAACUUCAA   4893 Target Full Sequence	2.5	PREDICTED: Glycine max ABC transporter B family member 21-like (LOC100777909), mRNA	ABC transporter B family member 21-like(LOC100777909)	coding protein	psRNATarget
XM_003551811.3	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   *||||*||||||||=||||| targets:5958   CUUUUGUUUCAGAAUUUCAA   5977 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 3-like (LOC100777209), mRNA	callose synthase 3-like(LOC100777209)	coding protein	psRNATarget
XM_006580141.2	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   ****|||||||||||||||| targets:2791   AACAUUUUUCAGAACUUCAA   2810 Target Full Sequence	3.0	PREDICTED: Glycine max disease resistance protein At4g27190-like (LOC102661619), transcript variant X1, mRNA	disease resistance protein At4g27190-like(LOC102661619)	coding protein	psRNATarget
XM_006585135.2	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   ****|||||||||||||||| targets:2784   AACAUUUUUCAGAACUUCAA   2803 Target Full Sequence	3.0	PREDICTED: Glycine max disease resistance protein At4g27190-like (LOC102668045), transcript variant X1, mRNA	disease resistance protein At4g27190-like(LOC102668045)	coding protein	psRNATarget
XM_006585136.2	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   ****|||||||||||||||| targets:2787   AACAUUUUUCAGAACUUCAA   2806 Target Full Sequence	3.0	PREDICTED: Glycine max disease resistance protein At4g27190-like (LOC102668045), transcript variant X3, mRNA	disease resistance protein At4g27190-like(LOC102668045)	coding protein	psRNATarget
XM_014778915.1	ncRNA:20   AAAAAAAAAGUCUUGAAGUU   1   ****|||||||||||||||| targets:3314   AACAUUUUUCAGAACUUCAA   3333 Target Full Sequence	3.0	PREDICTED: Glycine max disease resistance protein At4g27190-like (LOC102668045), transcript variant X2, mRNA	disease resistance protein At4g27190-like(LOC102668045)	coding protein	psRNATarget