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BaseInfo

ncRNA ID	novel_gma_miR3746
Species	Glycine max
Class	miRNA
Genome position	Chr15:27414871-27414990 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	101 - GAUUAAUGUUGGUGUGAAAA - 120
Stem-loop(if miRNA)	--GA      UU          UGU      A   G  --A  GUA     UAUC   UUCCUU     CACAUU  AUGUUAAUUC   UAUUGG CCA AU   CA   AGUUA    GGU      A     ||||||  ||||||||||   |||||| ||| ||   ||   |||||    |||     GUGUGG  UGUAAUUAGG   AUAAUC GGU UA   GU   UCAGU    CCA      U AAAA      -U          --U      G   G  CCG  AGG     ---U   UUUUUU
Stem-loop sequence	GACACAUUUUAUGUUAAUUCUGUUAUUGGACCAGAUACAGUAAGUUAUAUCGGUUUCCUUAUUUUUUUACCUUGACUGGAUGGCCAUGUGGGCUAAUAUGGAUUAAUGUUGGUGUGAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006597550.2	ncRNA:20   AAAAGUGUGGUUGUAAUUAG   1   *|*||||||||||||||||| targets:146   AUAUCACACCAACAUUAAUC   165 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like (LOC100813509), mRNA	pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like(LOC100813509)	coding protein	psRNATarget
XM_006597550.2	ncRNA:20   AAAAGUGUGGUUGUAAUUAG   1   *|*|||||||*||||||||| targets:109   AUAUCACACCCACAUUAAUC   128 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like (LOC100813509), mRNA	pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like(LOC100813509)	coding protein	psRNATarget
XM_006598756.2	ncRNA:20   AAAAGUGUGGUUGUAAUUAG   1   |||*||||||||||||*||| targets:2763   UUUGCACACCAACAUUUAUC   2782 Target Full Sequence	2.5	PREDICTED: Glycine max putative disease resistance protein At4g11170 (LOC100778934), transcript variant X2, mRNA	putative disease resistance protein At4g11170(LOC100778934)	coding protein	psRNATarget
XM_006598755.2	ncRNA:20   AAAAGUGUGGUUGUAAUUAG   1   |||*||||||||||||*||| targets:2834   UUUGCACACCAACAUUUAUC   2853 Target Full Sequence	2.5	PREDICTED: Glycine max putative disease resistance protein At4g11170 (LOC100778934), transcript variant X1, mRNA	putative disease resistance protein At4g11170(LOC100778934)	coding protein	psRNATarget