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BaseInfo

ncRNA ID novel_gma_miR3744
Species Glycine max
Class miRNA
Genome position Chr15:1494827-1494933 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676;SRR1451627
Length 20
Mature sequence(if miRNA) 88 - CCGGUAGAACAAAUUGUUCA - 107
Stem-loop(if miRNA) --                         -UUCUUCU  -   A           A
  AACAAUUUGUUCUACCGGAAGAACC        GG AGA GCUACCGGAAG A
  |||||||||||||||||||||||||        || ||| ||||||||||| G
  UUGUUAAACAAGAUGGCCUUUUUGG        CC UCU CGAUGGCCUUC U
AC                         CCCCCCCC  A   C           U
Stem-loop sequence AACAAUUUGUUCUACCGGAAGAACCUUCUUCUGGAGAAGCUACCGGAAGAAGUUCUUCCGGUAGCCUCUACCCCCCCCCCGGUUUUUCCGGUAGAACAAAUUGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778747.1
ncRNA:20   ACUUGUUAAACAAGAUGGCC   1
  *|=||||||||||||||=||
targets:2614   AGGACAAUUUGUUCUACUGG   2633

2.5 PREDICTED: Glycine max probable starch synthase 4, chloroplastic/amyloplastic (LOC100804775), transcript variant X2, mRNA probable starch synthase 4, chloroplastic/amyloplastic(LOC100804775) coding protein psRNATarget
XM_003531032.3
ncRNA:20   ACUUGUUAAACAAGAUGGCC   1
  *|=||||||||||||||=||
targets:2679   AGGACAAUUUGUUCUACUGG   2698

2.5 PREDICTED: Glycine max probable starch synthase 4, chloroplastic/amyloplastic (LOC100804775), transcript variant X1, mRNA probable starch synthase 4, chloroplastic/amyloplastic(LOC100804775) coding protein psRNATarget