ncRNA ID | novel_gma_miR3744 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:1494827-1494933 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676;SRR1451627 |
Length | 20 |
Mature sequence(if miRNA) | 88 - CCGGUAGAACAAAUUGUUCA - 107 |
Stem-loop(if miRNA) |
--                         -UUCUUCU  -   A           A   AACAAUUUGUUCUACCGGAAGAACC        GG AGA GCUACCGGAAG A   |||||||||||||||||||||||||        || ||| ||||||||||| G   UUGUUAAACAAGAUGGCCUUUUUGG        CC UCU CGAUGGCCUUC U AC                         CCCCCCCC  A   C           U |
Stem-loop sequence | AACAAUUUGUUCUACCGGAAGAACCUUCUUCUGGAGAAGCUACCGGAAGAAGUUCUUCCGGUAGCCUCUACCCCCCCCCCGGUUUUUCCGGUAGAACAAAUUGUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014778747.1 |
|
2.5 | PREDICTED: Glycine max probable starch synthase 4, chloroplastic/amyloplastic (LOC100804775), transcript variant X2, mRNA | probable starch synthase 4, chloroplastic/amyloplastic(LOC100804775) | coding protein | psRNATarget | |||||||||
XM_003531032.3 |
|
2.5 | PREDICTED: Glycine max probable starch synthase 4, chloroplastic/amyloplastic (LOC100804775), transcript variant X1, mRNA | probable starch synthase 4, chloroplastic/amyloplastic(LOC100804775) | coding protein | psRNATarget |