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BaseInfo

ncRNA ID	novel_gma_miR3743
Species	Glycine max
Class	miRNA
Genome position	Chr15:11787523-11787715 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	174 - UUACAUGAAUCAAAAUUAAA - 193
Stem-loop(if miRNA)	UUC         -   U     ---------UUU                    UUGUUU             --  UC  U     UUUU     UUCAUCUA    AAUUUUGAU CAU GUAAG            UUUUUAGUUCUUAUAAGUUU      UUUUUUUUAAUUU  AU  CU UAAGA    AACUU        U    ||||||||| ||| |||||            ||||||||||||||||||||      |||||||||||||  ||  || |||||    |||||    UUAAAACUA GUA CAUUC            AAAAAUCAGGAAUAUUUAAA      AAAAAAAGUUAAA  UA  GA AUUCU    UUGAA        A AAA         A   -     UAUAAAAUAAGU                    ---UGU             AC  UA  U     -UGU     UACUUUUG
Stem-loop sequence	UUCAAUUUUGAUCAUUGUAAGUUUUUUUUAGUUCUUAUAAGUUUUUGUUUUUUUUUUUAAUUUAUUCCUUUAAGAUUUUAACUUUUCAUCUAUAGUUUUCAUAAGUUUGUUCUUAUAGAUAUCAAAAUUGAAAAAAAUGUAAAUUUAUAAGGACUAAAAAUGAAUAAAAUAUCUUACAUGAAUCAAAAUUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003549138.3	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   *|||||||||||*||||||| targets:1311   GUUAAUUUUGAUGCAUGUAA   1330 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized protein At4g15970-like (LOC100783429), mRNA	uncharacterized protein At4g15970-like(LOC100783429)	coding protein	psRNATarget
XM_003549555.3	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   ||||||||||=||||||||* targets:1898   UUUAAUUUUGGUUCAUGUAU   1917 Target Full Sequence	2.5	PREDICTED: Glycine max histone deacetylase 6-like (LOC100819221), mRNA	histone deacetylase 6-like(LOC100819221)	coding protein	psRNATarget
XM_003531404.3	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   |||=||||||*||||||||| targets:2553   UUUGAUUUUGUUUCAUGUAA   2572 Target Full Sequence	2.5	PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase YODA-like (LOC100780004), transcript variant X3, mRNA	mitogen-activated protein kinase kinase kinase YODA-like(LOC100780004)	coding protein	psRNATarget
XM_014778994.1	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   |||=||||||*||||||||| targets:2580   UUUGAUUUUGUUUCAUGUAA   2599 Target Full Sequence	2.5	PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase YODA-like (LOC100780004), transcript variant X2, mRNA	mitogen-activated protein kinase kinase kinase YODA-like(LOC100780004)	coding protein	psRNATarget
XM_006585299.2	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   |||=||||||*||||||||| targets:2640   UUUGAUUUUGUUUCAUGUAA   2659 Target Full Sequence	2.5	PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase YODA-like (LOC100780004), transcript variant X1, mRNA	mitogen-activated protein kinase kinase kinase YODA-like(LOC100780004)	coding protein	psRNATarget
XM_003533699.3	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   **||=|*||||||||||||| targets:1472   AGUAGUCUUGAUUCAUGUAA   1491 Target Full Sequence	3.0	PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 6-like (LOC100776295), mRNA	plant intracellular Ras-group-related LRR protein 6-like(LOC100776295)	coding protein	psRNATarget
AK285181.1	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   **|=|*|||||||||||||| targets:1784   AAUGAAUUUGAUUCAUGUAA   1803 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-03-N07	NA	coding protein	psRNATarget
AK285301.1	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   **|=|*|||||||||||||| targets:3595   AAUGAAUUUGAUUCAUGUAA   3614 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-07-B03	NA	coding protein	psRNATarget
XM_003550222.3	ncRNA:20   AAAUUAAAACUAAGUACAUU   1   **|=|*|||||||||||||| targets:3595   AAUGAAUUUGAUUCAUGUAA   3614 Target Full Sequence	3.0	PREDICTED: Glycine max glycine dehydrogenase (decarboxylating), mitochondrial (LOC100777528), mRNA	glycine dehydrogenase (decarboxylating), mitochondrial(LOC100777528)	coding protein	psRNATarget