ncRNA ID | novel_gma_miR3737 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:6265996-6266173 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 159 - UGUUUGUCUGUUUCAAAUCU - 178 |
Stem-loop(if miRNA) |
--                    GAA           UCG                C         UUAUC      GUCAUCGUUGGAAGC   UGUUUGUCUGUUUCAAAUCU   AUCCUUAAUCA   GAAAGAUUACAUGUUU UUUGGAUAU     UUGCUU               A   ||||||||||||||||||||   |||||||||||   |||||||||||||||| |||||||||     ||||||   ACAAAUAGACAAAGUUUAGG   UAGGGAUUAGU   UUUUCUAAUGUACAAA AGAUCUAUA     AGAGAA               A UA                    AAC           UCA                U         ----C      ACAUUUUUUUAAACU |
Stem-loop sequence | UGUUUGUCUGUUUCAAAUCUGAAAUCCUUAAUCAUCGGAAAGAUUACAUGUUUCUUUGGAUAUUUAUCUUGCUUGUCAUCGUUGGAAGCAAUCAAAUUUUUUUACAAAGAGACAUAUCUAGAUAAACAUGUAAUCUUUUACUUGAUUAGGGAUCAAGGAUUUGAAACAGAUAAACAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006591894.2 |
|
2.5 | PREDICTED: Glycine max endoglucanase 8-like (LOC100808980), mRNA | endoglucanase 8-like(LOC100808980) | coding protein | psRNATarget | |||||||||
XM_003517500.3 |
|
2.5 | PREDICTED: Glycine max cellulose synthase-like protein D2 (LOC100792604), mRNA | cellulose synthase-like protein D2(LOC100792604) | coding protein | psRNATarget |