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BaseInfo

ncRNA ID novel_gma_miR3731
Species Glycine max
Class miRNA
Genome position Chr15:44061669-44061786 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - UAUGAUUGGAGAAUAACACU - 20
Stem-loop(if miRNA) --CCA             G    A   U          A   C     U     UU   G
     UGUUUUCCGAUCA AAUU GAG UUUACCUCGG AAU UGUGU GGUAU  GAU U
     ||||||||||||| |||| ||| |||||||||| ||| ||||| |||||  |||
     AUAAGAGGUUAGU UUAA CUC AAGUGGAGCC UUA ACGUA UUAUA  CUA G
UCACA             A    C   U          A   A     -     -U   A
Stem-loop sequence CCAUGUUUUCCGAUCAGAAUUAGAGUUUUACCUCGGAAAUCUGUGUUGGUAUUUGAUGUGAAUCUAUAUUAUGCAAAUUACCGAGGUGAAUCUCCAAUUAUGAUUGGAGAAUAACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583153.2
ncRNA:20   UCACAAUAAGAGGUUAGUAU   1
  =|||||*|||||||||||*|
targets:741   GGUGUUUUUCUCCAAUCACA   760

2.5 PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X2, mRNA protein yippee-like At4g27745(LOC100788878) coding protein psRNATarget
XM_006583151.2
ncRNA:20   UCACAAUAAGAGGUUAGUAU   1
  =|||||*|||||||||||*|
targets:875   GGUGUUUUUCUCCAAUCACA   894

2.5 PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X1, mRNA protein yippee-like At4g27745(LOC100788878) coding protein psRNATarget