ncRNA ID | novel_gma_miR3731 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:44061669-44061786 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UAUGAUUGGAGAAUAACACU - 20 |
Stem-loop(if miRNA) |
--CCA             G    A   U          A   C     U     UU   G      UGUUUUCCGAUCA AAUU GAG UUUACCUCGG AAU UGUGU GGUAU  GAU U      ||||||||||||| |||| ||| |||||||||| ||| ||||| |||||  |||      AUAAGAGGUUAGU UUAA CUC AAGUGGAGCC UUA ACGUA UUAUA  CUA G UCACA             A    C   U          A   A     -     -U   A |
Stem-loop sequence | CCAUGUUUUCCGAUCAGAAUUAGAGUUUUACCUCGGAAAUCUGUGUUGGUAUUUGAUGUGAAUCUAUAUUAUGCAAAUUACCGAGGUGAAUCUCCAAUUAUGAUUGGAGAAUAACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583153.2 |
|
2.5 | PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X2, mRNA | protein yippee-like At4g27745(LOC100788878) | coding protein | psRNATarget | |||||||||
XM_006583151.2 |
|
2.5 | PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X1, mRNA | protein yippee-like At4g27745(LOC100788878) | coding protein | psRNATarget |