ncRNA ID | novel_gma_miR3728 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:49400250-49400329 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 61 - AUGGUUUGUAAAUAAAUUGU - 80 |
Stem-loop(if miRNA) |
--     UU         UUGUAUAAAUUAUU             AUGGU  GUAAAUAAA              UCUAGAAAUGA   |||||  |||||||||              ||||||||||G   UAUUA  UAUUUAUUU              AGGUUUUUACC UU     -U         ----UUGACUCAAU           |
Stem-loop sequence | AUGGUUUGUAAAUAAAUUGUAUAAAUUAUUUCUAGAAAUGAGCCAUUUUUGGAUAACUCAGUUUUUAUUUAUUAUUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518319.3 |
|
1.5 | PREDICTED: Glycine max transcription repressor KAN1-like (LOC100796325), transcript variant X1, mRNA | transcription repressor KAN1-like(LOC100796325) | coding protein | psRNATarget | |||||||||
XM_014767275.1 |
|
1.5 | PREDICTED: Glycine max transcription repressor KAN1-like (LOC100812229), transcript variant X2, mRNA | transcription repressor KAN1-like(LOC100812229) | coding protein | psRNATarget | |||||||||
XM_003544310.3 |
|
1.5 | PREDICTED: Glycine max transcription repressor KAN1-like (LOC100812229), transcript variant X1, mRNA | transcription repressor KAN1-like(LOC100812229) | coding protein | psRNATarget |