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BaseInfo

ncRNA ID novel_gma_miR3727
Species Glycine max
Class miRNA
Genome position Chr15:51453660-51453702 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - AUUAAUAUAUAUGUAAUGGU - 20
Stem-loop(if miRNA) AUUAAUAUAUAUGUAA          
                UGGUCUUUAUU
                ||||||||||A
                AUUAGAAAUAG
------------GAUA          
Stem-loop sequence AUUAAUAUAUAUGUAAUGGUCUUUAUUAGAUAAAGAUUAAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532465.3
ncRNA:20   UGGUAAUGUAUAUAUAAUUA   1
  |=||||*|||||||||||||
targets:2258   AUCAUUCCAUAUAUAUUAAU   2277

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100781427), mRNA probable receptor-like protein kinase At1g67000(LOC100781427) coding protein psRNATarget
XM_014762432.1
ncRNA:20   UGGUAAUGUAUAUAUAAUUA   1
  *||*||=|||||||||||||
targets:3338   UCCUUUGCAUAUAUAUUAAU   3357

2.0 PREDICTED: Glycine max putative disease resistance protein RGA4 (LOC102666485), transcript variant X1, mRNA putative disease resistance protein RGA4(LOC102666485) coding protein psRNATarget
XM_014762433.1
ncRNA:20   UGGUAAUGUAUAUAUAAUUA   1
  *||*||=|||||||||||||
targets:3338   UCCUUUGCAUAUAUAUUAAU   3357

2.0 PREDICTED: Glycine max putative disease resistance protein RGA4 (LOC102666485), transcript variant X2, mRNA putative disease resistance protein RGA4(LOC102666485) coding protein psRNATarget