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BaseInfo

ncRNA ID	novel_gma_miR3726
Species	Glycine max
Class	miRNA
Genome position	Chr15:51032702-51032916 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	19
Mature sequence(if miRNA)	197 - AUAAGCUUAUCCAAACAUG - 215
Stem-loop(if miRNA)	--           A   C           C  UG           ----------   -         G     CA  U      U    -A          ---     U   A   UGUUUGGAUAA UUU UCCAGAAGCAC UU  GGAGAAGAAAA          AAC UGAAAUGAG UUCUU  UA GCUAAA UUAG  UUAUACAUAA   ACUUG AGA G   ||||||||||| ||| ||||||||||| ||  |||||||||||          ||| ||||||||| |||||  || |||||| ||||  ||||||||||   ||||| ||| C   ACAAACCUAUU GAA AGGUCUUUGUG AG  CCUUUUCUUUU          UUG ACUUUACUC AAGAG  AU CGAUUU AAUC  AAUAUGUAUU   UGAAC UCU U GU           C   U           A  GU           AUUCUUCUUU   U         G     AG  U      U    CA          CAA     -   U
Stem-loop sequence	UGUUUGGAUAAAUUUCUCCAGAAGCACCUUUGGGAGAAGAAAAAACUGAAAUGAGGUUCUUCAUAUGCUAAAUUUAGAUUAUACAUAAACUUGUAGAAGCUUUCUCAAGUAACUUAUGUAUAAACCUAAUUUUAGCUUAGAGAGAAGCUCAUUUCAUGUUUUUCUUCUUAUUUUCUUUUCCUGGAAGUGUUUCUGGAUAAGCUUAUCCAAACAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006597611.2	ncRNA:19   GUACAAACCUAUUCGAAUA   1   =|*|||||||||||||||| targets:527   UAAGUUUGGAUAAGCUUAU   545 Target Full Sequence	2.0	PREDICTED: Glycine max telomere repeat-binding factor 1-like (LOC100780698), transcript variant X3, mRNA	telomere repeat-binding factor 1-like(LOC100780698)	coding protein	psRNATarget
XM_003546242.3	ncRNA:19   GUACAAACCUAUUCGAAUA   1   =|*|||||||||||||||| targets:546   UAAGUUUGGAUAAGCUUAU   564 Target Full Sequence	2.0	PREDICTED: Glycine max telomere repeat-binding factor 1-like (LOC100780698), transcript variant X2, mRNA	telomere repeat-binding factor 1-like(LOC100780698)	coding protein	psRNATarget
XM_006597610.2	ncRNA:19   GUACAAACCUAUUCGAAUA   1   =|*|||||||||||||||| targets:634   UAAGUUUGGAUAAGCUUAU   652 Target Full Sequence	2.0	PREDICTED: Glycine max telomere repeat-binding factor 1-like (LOC100780698), transcript variant X1, mRNA	telomere repeat-binding factor 1-like(LOC100780698)	coding protein	psRNATarget
XM_006603606.2	ncRNA:19   GUACAAACCUAUUCGAAUA   1   |*|||||||||||||||*| targets:1374   CUUGUUUGGAUAAGCUUCU   1392 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:19   GUACAAACCUAUUCGAAUA   1   |*|||||||||||||||*| targets:1384   CUUGUUUGGAUAAGCUUCU   1402 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget