Search result

BaseInfo

ncRNA ID	novel_gma_miR3722
Species	Glycine max
Class	miRNA
Genome position	Chr7:14199234-14199306 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292924;SRR1295520;SRR1295524;SRR1292929
Length	24
Mature sequence(if miRNA)	50 - AAGGAGAUGAGCUUAGUUAUGAGA - 73
Stem-loop(if miRNA)	--GU            UAA      UA    U    U     GUAGCUAAGCUC   CUUCUU  GGAA CUUC C     ||||||||||||   ||||||  |||| |||| A     UAUUGAUUCGAG   GAGGAA  UCUU GAAG A AGAG            -UA      -C    C    G
Stem-loop sequence	GUGUAGCUAAGCUCUAACUUCUUUAGGAAUCUUCUCAAGGAAGCUUCUCAAGGAGAUGAGCUUAGUUAUGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT090266.1	ncRNA:24   AGAGUAUUGA-UUCGAGUAGAGGAA   1   |*|*|||||*-|||||||||||||| targets:202   UAUGAUAACAGAAGCUCAUCUCCUU   226 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-4E15 unknown mRNA	NA	coding protein	psRNATarget
XM_003542700.3	ncRNA:24   AGAGUAUUGA-UUCGAGUAGAGGAA   1   |*|*|||||*-|||||||||||||| targets:739   UAUGAUAACAGAAGCUCAUCUCCUU   763 Target Full Sequence	3.0	PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC100306246)	coding protein	psRNATarget
XM_006594256.2	ncRNA:24   AGAGUAUUGA-UUCGAGUAGAGGAA   1   |*|*|||||*-|||||||||||||| targets:774   UAUGAUAACAGAAGCUCAUCUCCUU   798 Target Full Sequence	3.0	PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA	probable ubiquitin-conjugating enzyme E2 24(LOC100306246)	coding protein	psRNATarget