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BaseInfo

ncRNA ID novel_gma_miR3716
Species Glycine max
Class miRNA
Genome position Chr14:9611037-9611120 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 19
Mature sequence(if miRNA) 66 - UUAGAAGGAGAACUUAAAU - 84
Stem-loop(if miRNA) --UC    CU  G                     AUUAAAGA
    AAGU  UU UUUUAAUGUCAAUGUUUCAAU        G
    ||||  || |||||||||||||||||||||
    UUCA  AG AAGAUUACAGUUACAGAGUUA        G
UAAA    AG  G                     ACAAGGUU
Stem-loop sequence UCAAGUCUUUGUUUUAAUGUCAAUGUUUCAAUAUUAAAGAGGUUGGAACAAUUGAGACAUUGACAUUAGAAGGAGAACUUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775330.1
ncRNA:19   UAAAUUCAAGAGGAAGAUU   1
  ||*||||||*|||||||||
targets:809   AUCUAAGUUAUCCUUCUAA   827

2.5 PREDICTED: Glycine max MOB kinase activator-like 1B (LOC100808006), transcript variant X1, mRNA MOB kinase activator-like 1B(LOC100808006) coding protein psRNATarget
AK286970.1
ncRNA:19   UAAAUUCAAGAGGAAGAUU   1
  ||*||||||*|||||||||
targets:830   AUCUAAGUUAUCCUUCUAA   848

2.5 Glycine max cDNA, clone: GMFL01-41-C20 NA coding protein psRNATarget
XM_003517027.3
ncRNA:19   UAAAUUCAAGAGGAAGAUU   1
  ||*||||||*|||||||||
targets:907   AUCUAAGUUAUCCUUCUAA   925

2.5 PREDICTED: Glycine max MOB kinase activator-like 1B (LOC100808006), transcript variant X2, mRNA MOB kinase activator-like 1B(LOC100808006) coding protein psRNATarget
XM_006586547.2
ncRNA:19   UAAAUUCAAGAGGAAGAUU   1
  ||*||||||*|||||||||
targets:928   AUCUAAGUUAUCCUUCUAA   946

2.5 PREDICTED: Glycine max uncharacterized LOC100305693 (LOC100305693), transcript variant X1, mRNA uncharacterized LOC100305693(LOC100305693) coding protein psRNATarget
XM_003522527.3
ncRNA:19   UAAAUUCAAGAGGAAGAUU   1
  |*|||||||||||||||*|
targets:697   AAUUAAGUUCUCCUUCUCA   715

2.5 PREDICTED: Glycine max uncharacterized LOC100782069 (LOC100782069), mRNA uncharacterized LOC100782069(LOC100782069) coding protein psRNATarget