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BaseInfo

ncRNA ID	novel_gma_miR3715
Species	Glycine max
Class	miRNA
Genome position	Chr14:7087115-7087167 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	21
Mature sequence(if miRNA)	1 - UCGUGUCGAUGUCGGACACUG - 21
Stem-loop(if miRNA)	--      -  A    G     -  AU   UCGUGU CG UGUC GACAC UG  A   |||||| || |||| ||||| ||  C   AGCACA GC ACAG CUGUG GC  G AC      A  C    G     C  AG
Stem-loop sequence	UCGUGUCGAUGUCGGACACUGAUACGGACGCGUGUCGGACACCGAACACGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003525712.3	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||||||||||| targets:2540   CAGUGUCCGACAUCGACACGA   2560 Target Full Sequence	0.0	PREDICTED: Glycine max protein NSP-INTERACTING KINASE 2-like (LOC100779591), mRNA	protein NSP-INTERACTING KINASE 2-like(LOC100779591)	coding protein	psRNATarget
XM_003530731.3	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   =|||||||||||||||||||| targets:1975   UAGUGUCCGACAUCGACACGA   1995 Target Full Sequence	0.0	PREDICTED: Glycine max beta-(1,2)-xylosyltransferase-like (LOC100816008), mRNA	beta-(1,2)-xylosyltransferase-like(LOC100816008)	coding protein	psRNATarget
XM_003545133.3	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||| targets:1172   CAGUGUCCGACACCGACACGA   1192 Target Full Sequence	1.5	PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100787282), mRNA	probable polygalacturonase At3g15720(LOC100787282)	coding protein	psRNATarget
XM_006585684.2	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||| targets:209   CAGUGUCCGACACCGACACGA   229 Target Full Sequence	1.5	PREDICTED: Glycine max E3 ubiquitin-protein ligase ORTHRUS 2-like (LOC102664187), mRNA	E3 ubiquitin-protein ligase ORTHRUS 2-like(LOC102664187)	coding protein	psRNATarget
XM_006589307.2	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||| targets:656   CAGUGUCCGACACCGACACGA   676 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100791948 (LOC100791948), mRNA	uncharacterized LOC100791948(LOC100791948)	coding protein	psRNATarget
XM_014773491.1	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||| targets:730   CAGUGUCCGACACCGACACGA   750 Target Full Sequence	1.5	PREDICTED: Glycine max clustered mitochondria protein-like (LOC106798035), mRNA	clustered mitochondria protein-like(LOC106798035)	coding protein	psRNATarget
XM_014771574.1	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   =|||||||||||*|||||||| targets:58   UAGUGUCCGACACCGACACGA   78 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100817255 (LOC100817255), mRNA	uncharacterized LOC100817255(LOC100817255)	coding protein	psRNATarget
XM_006594204.2	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   |||||||=||||*|||||||| targets:2301   CAGUGUCUGACACCGACACGA   2321 Target Full Sequence	2.5	PREDICTED: Glycine max histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like (LOC100812749), mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like(LOC100812749)	coding protein	psRNATarget
XM_006596348.2	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||=|||||*|||||||| targets:1051   CAGUGUUCGACACCGACACGA   1071 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100806179 (LOC100806179), mRNA	uncharacterized LOC100806179(LOC100806179)	coding protein	psRNATarget
HI410598.1	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||* targets:22   CAGUGUCCGACACCGACACGC   42 Target Full Sequence	2.5	Sequence 8723 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242728.1	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||* targets:22   CAGUGUCCGACACCGACACGC   42 Target Full Sequence	2.5	Sequence 8723 from Patent EP2985353	NA	coding protein	psRNATarget
JB171059.1	ncRNA:21   GUCACAGGCUGUAGCUGUGCU   1   ||||||||||||*|||||||* targets:22   CAGUGUCCGACACCGACACGC   42 Target Full Sequence	2.5	Sequence 8723 from Patent EP2559767	NA	coding protein	psRNATarget