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BaseInfo

ncRNA ID	novel_gma_miR3713
Species	Glycine max
Class	miRNA
Genome position	Chr14:6459096-6459232 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	19
Mature sequence(if miRNA)	119 - UUUAGAAGCACUUCUAAGA - 137
Stem-loop(if miRNA)	--                A     A             U    U    --   AC    A   A    AA   UUUAGAAGCACUUCUA GAGAA AAAAUAAGAAGAA AAAA GUGA  UGA  UUCU CAU AGCU  G   |||||||||||||||| ||||| ||||||||||||| |||| ||||  |||  |||| ||| ||||   AAAUCUUCGUGAGGAU CUCUU UUUUAUUUUUCUU UUUU CACU  ACU  AAGA GUA UCGA  A AG                C     C             U    -    UU   CU    G   A    GU
Stem-loop sequence	UUUAGAAGCACUUCUAAGAGAAAAAAAUAAGAAGAAUAAAAUGUGAUGAACUUCUACAUAAGCUAAGAUGAGCUAAUGGAGAAUCUCAUUUCACUUUUUUUCUUUUUAUUUUCUUCUCCUAGGAGUGCUUCUAAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594197.2	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |=||||||||||||||||| targets:936   UUUUAGAAGUGCUUCUAAA   954 Target Full Sequence	1.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget
XM_003541440.3	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |=||||||||||||||||| targets:936   UUUUAGAAGUGCUUCUAAA   954 Target Full Sequence	1.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget
XM_014763080.1	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||||||||||=||||||| targets:3722   UCUUAGAAGUGUUUCUAAA   3740 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||||||||||=||||||| targets:3827   UCUUAGAAGUGUUUCUAAA   3845 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||||||||||=||||||| targets:3958   UCUUAGAAGUGUUUCUAAA   3976 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||||||||||=||||||| targets:3970   UCUUAGAAGUGUUUCUAAA   3988 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||||||||||=||||||| targets:4059   UCUUAGAAGUGUUUCUAAA   4077 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006587433.2	ncRNA:19   AGAAUCUUCACGAAGAUUU   1   |||*||||*|||||||||| targets:123   UCUGAGAACUGCUUCUAAA   141 Target Full Sequence	2.5	PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC102665158), transcript variant X3, mRNA	probable receptor-like protein kinase At1g67000(LOC102665158)	coding protein	psRNATarget