ncRNA ID | novel_gma_miR3712 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:10848628-10848774 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294485;SRR1295519 |
Length | 24 |
Mature sequence(if miRNA) | 124 - AAGUGGACGUUGACGGUUAAUAGC - 147 |
Stem-loop(if miRNA) |
--              G      A C   UA      A      A        C        A    UUU   U   AAGUGGACGUUGAC GUUAAU G UAA  UUGAUU UUAUAU UCAUAAUC UAUUGGAU UUAA   UGG A   |||||||||||||| |||||| | |||  |||||| |||||| |||||||| |||||||| ||||   |||   UUCAUCUGCAACUG UAAUUA U AUU  AAUUAA AGUGUA AGUAUUAG AUAAUCUA AAUU   ACC C UU              A      C U   UC      C      C        A        C    -UU   A |
Stem-loop sequence | AAGUGGACGUUGACGGUUAAUAGCUAAUAUUGAUUAUUAUAUAUCAUAAUCCUAUUGGAUAUUAAUUUUGGUACACCAUUUUAACAUCUAAUAAGAUUAUGACAUGUGACAAUUAACUUUAUUCAUUAAUAGUCAACGUCUACUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |