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BaseInfo

ncRNA ID novel_gma_miR3712
Species Glycine max
Class miRNA
Genome position Chr6:10848628-10848774 [-]
Reference genome Glycine_max_v2.0
Source SRR1294485;SRR1295519
Length 24
Mature sequence(if miRNA) 124 - AAGUGGACGUUGACGGUUAAUAGC - 147
Stem-loop(if miRNA) --              G      A C   UA      A      A        C        A    UUU   U
  AAGUGGACGUUGAC GUUAAU G UAA  UUGAUU UUAUAU UCAUAAUC UAUUGGAU UUAA   UGG A
  |||||||||||||| |||||| | |||  |||||| |||||| |||||||| |||||||| ||||   |||
  UUCAUCUGCAACUG UAAUUA U AUU  AAUUAA AGUGUA AGUAUUAG AUAAUCUA AAUU   ACC C
UU              A      C U   UC      C      C        A        C    -UU   A
Stem-loop sequence AAGUGGACGUUGACGGUUAAUAGCUAAUAUUGAUUAUUAUAUAUCAUAAUCCUAUUGGAUAUUAAUUUUGGUACACCAUUUUAACAUCUAAUAAGAUUAUGACAUGUGACAAUUAACUUUAUUCAUUAAUAGUCAACGUCUACUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:24   CGAUAAUUGGCAGUUGCAGGUGAA   1
  *=|=*||||*|||||||||||*||
targets:702   CUUGCUAACGGUCAACGUCCAAUU   725

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget