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BaseInfo

ncRNA ID	novel_gma_miR3711
Species	Glycine max
Class	miRNA
Genome position	Chr14:13735393-13735597 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	186 - GUCUGUAAACUAAAAAAAAA - 205
Stem-loop(if miRNA)	--    G               -    UUAAUC            UC    C       U        AUUCUU    U     UAUGACAACUAA         CAUAAA   GUCU UAAACUAAAAAAAAA UGUA      UGGAUCUUUGAU  UCUA AAUUUUU GUAAUUGG      GGAG GAGUU            AAACCAUCA      A   |||| ||||||||||||||| ||||      ||||||||||||  |||| ||||||| ||||||||      |||| |||||            |||||||||      A   CAGA AUUUGAUUUUUUUUU ACAU      ACUUAGAAACUA  AGAU UUGAAAA CAUUAAUC      CCUC UUCAA            UUUGGUAGU      A UU    G               U    ----UA            GA    A       -        ---CAU    -     --------UUAG         CUUCAA
Stem-loop sequence	GUCUGUAAACUAAAAAAAAAUGUAUUAAUCUGGAUCUUUGAUUCUCUACAAUUUUUUGUAAUUGGAUUCUUGGAGUGAGUUUAUGACAACUAAAAACCAUCACAUAAAAAAAACUUCUGAUGGUUUGAUUAACUUCUCCUACCUAAUUACAAAAGUUAUAGAAGAUCAAAGAUUCAAUUACAUUUUUUUUUUAGUUUAGAGACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006592677.2	ncRNA:20   AAAAAAAAAUCAAAUGUCUG   1   ***||||||||||||||||| targets:437   AAGUUUUUUAGUUUACAGAC   456 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100800807 (LOC100800807), transcript variant X1, mRNA	uncharacterized LOC100800807(LOC100800807)	coding protein	psRNATarget
XM_003540180.3	ncRNA:20   AAAAAAAAAUCAAAUGUCUG   1   ***||||||||||||||||| targets:379   AAGUUUUUUAGUUUACAGAC   398 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100800807 (LOC100800807), transcript variant X2, mRNA	uncharacterized LOC100800807(LOC100800807)	coding protein	psRNATarget
XM_006592678.2	ncRNA:20   AAAAAAAAAUCAAAUGUCUG   1   ***||||||||||||||||| targets:302   AAGUUUUUUAGUUUACAGAC   321 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100800807 (LOC100800807), transcript variant X3, mRNA	uncharacterized LOC100800807(LOC100800807)	coding protein	psRNATarget