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BaseInfo

ncRNA ID novel_gma_miR3710
Species Glycine max
Class miRNA
Genome position Chr14:18143258-18143296 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 19
Mature sequence(if miRNA) 1 - GAAAGUGGGGAUUGAUUUG - 19
Stem-loop(if miRNA) --    C         GAG
  AAUU AUCUCCACU   C
  |||| |||||||||   C
  UUAG UAGGGGUGA   A
GU    U         AAG
Stem-loop sequence AAUUCAUCUCCACUGAGCCAGAAAGUGGGGAUUGAUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255359.2
ncRNA:19   GUUUAGUUAGGGGUGAAAG   1
  |||*|||||||||*|||||
targets:323   CAACUCAAUCCCCUCUUUC   341

2.5 Glycine max uncharacterized LOC100804454 (LOC100804454), mRNA uncharacterized LOC100804454(LOC100804454) coding protein psRNATarget
BT096660.1
ncRNA:19   GUUUAGUUAGGGGUGAAAG   1
  |||*|||||||||*|||||
targets:325   CAACUCAAUCCCCUCUUUC   343

2.5 Soybean clone JCVI-FLGm-21A17 unknown mRNA NA coding protein psRNATarget
XM_006589498.2
ncRNA:19   GUUUAGUUAGGGGUGAAAG   1
  |||=*|||||||||||||=
targets:1646   CAAGACAAUCCCCACUUUU   1664

3.0 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC102668067), mRNA protein IQ-DOMAIN 1-like(LOC102668067) coding protein psRNATarget