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BaseInfo

ncRNA ID novel_gma_miR3703
Species Glycine max
Class miRNA
Genome position Chr6:12854696-12854815 [+]
Reference genome Glycine_max_v2.0
Source SRR1294485;SRR1295518;SRR1295524;SRR1295525;SRR1295530;SRR1294476
Length 24
Mature sequence(if miRNA) 97 - AUUUGGUUGGGAUCAUAGAUGAUA - 120
Stem-loop(if miRNA) --          CA        -            ACGUA      CAAAGA      C UU
  UUAUUUAUGG  UCAACCAA UAAUCAUGUGAU     AAUGAU      UAUAUU A  A
  ||||||||||  |||||||| ||||||||||||     ||||||      |||||| |
  AGUAGAUACU  GGUUGGUU AUUAGUACACUG     UUAUUA      AUAUAA U  A
AU          AG        U            ---GA      AAUCAA      A UA
Stem-loop sequence UUAUUUAUGGCAUCAACCAAUAAUCAUGUGAUACGUAAAUGAUCAAAGAUAUAUUCAUUAAAUUAAAUAUAAACUAAAUUAUUAGGUCACAUGAUUAUUUGGUUGGGAUCAUAGAUGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597283.2
ncRNA:24   AUAG--UAGAUACUAGGGUUGGUUUA   1
  **||--|||*|||||||||||||||*
targets:1082   CUUCCGAUCAAUGAUCCCAACCAAAG   1107

2.0 PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X3, mRNA uncharacterized LOC100816531(LOC100816531) coding protein psRNATarget
XM_014768025.1
ncRNA:24   AUAG--UAGAUACUAGGGUUGGUUUA   1
  **||--|||*|||||||||||||||*
targets:1099   CUUCCGAUCAAUGAUCCCAACCAAAG   1124

2.0 PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X2, mRNA uncharacterized LOC100816531(LOC100816531) coding protein psRNATarget
XM_003547030.3
ncRNA:24   AUAG--UAGAUACUAGGGUUGGUUUA   1
  **||--|||*|||||||||||||||*
targets:1192   CUUCCGAUCAAUGAUCCCAACCAAAG   1217

2.0 PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X1, mRNA uncharacterized LOC100816531(LOC100816531) coding protein psRNATarget