ncRNA ID | novel_gma_miR3703 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:12854696-12854815 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294485;SRR1295518;SRR1295524;SRR1295525;SRR1295530;SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 97 - AUUUGGUUGGGAUCAUAGAUGAUA - 120 |
Stem-loop(if miRNA) |
--          CA        -            ACGUA      CAAAGA      C UU   UUAUUUAUGG  UCAACCAA UAAUCAUGUGAU     AAUGAU      UAUAUU A  A   ||||||||||  |||||||| ||||||||||||     ||||||      |||||| |   AGUAGAUACU  GGUUGGUU AUUAGUACACUG     UUAUUA      AUAUAA U  A AU          AG        U            ---GA      AAUCAA      A UA |
Stem-loop sequence | UUAUUUAUGGCAUCAACCAAUAAUCAUGUGAUACGUAAAUGAUCAAAGAUAUAUUCAUUAAAUUAAAUAUAAACUAAAUUAUUAGGUCACAUGAUUAUUUGGUUGGGAUCAUAGAUGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006597283.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X3, mRNA | uncharacterized LOC100816531(LOC100816531) | coding protein | psRNATarget | |||||||||
XM_014768025.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X2, mRNA | uncharacterized LOC100816531(LOC100816531) | coding protein | psRNATarget | |||||||||
XM_003547030.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100816531 (LOC100816531), transcript variant X1, mRNA | uncharacterized LOC100816531(LOC100816531) | coding protein | psRNATarget |