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BaseInfo

ncRNA ID	novel_gma_miR3698
Species	Glycine max
Class	miRNA
Genome position	Chr13:31010712-31010854 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	124 - AAAUUUUGAUUAAAAAAAAU - 143
Stem-loop(if miRNA)	--UAA           U     U    GC         -------AUUUUU     UUAACAUAUUCAUUUUAGG      UUUUAAUCAAA UUUUA UUUU  CUAUAUUUU             UGCCU                   U      ||||||||||| ||||| ||||  |||||||||             |||||      AAAAUUAGUUU AAAAU AAAA  GAUAUAAAA             AUUAA                   A UAAAA           U     U    AA         AAAAUAAUAUAAA     UUAAUUUAGUAAAACUAUU
Stem-loop sequence	UAAUUUUAAUCAAAUUUUUAUUUUUGCCUAUAUUUUAUUUUUUGCCUUUAACAUAUUCAUUUUAGGUAUUAUCAAAAUGAUUUAAUUAAUUAAAAUAUAAUAAAAAAAAUAUAGAAAAAAUUAAAAUUUUGAUUAAAAAAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766190.1	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   *|||||||||=||||||||| targets:28   UUUUUUUUUAGUCAAAAUUU   47 Target Full Sequence	1.5	PREDICTED: Glycine max apoptosis-linked gene 2-interacting protein X 1 (LOC100804844), transcript variant X2, mRNA	apoptosis-linked gene 2-interacting protein X 1(LOC100804844)	coding protein	psRNATarget
XM_003521631.3	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   ||*|||||||*||||||||| targets:2594   AUCUUUUUUAUUCAAAAUUU   2613 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/LRR-repeat protein 3-like (LOC100802904), transcript variant X1, mRNA	F-box/LRR-repeat protein 3-like(LOC100802904)	coding protein	psRNATarget
XM_014773991.1	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   ||*|||||||*||||||||| targets:2595   AUCUUUUUUAUUCAAAAUUU   2614 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/LRR-repeat protein 3-like (LOC100802904), transcript variant X2, mRNA	F-box/LRR-repeat protein 3-like(LOC100802904)	coding protein	psRNATarget
XM_006604735.2	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   ||*|||||||*||||||||| targets:2603   AUCUUUUUUAUUCAAAAUUU   2622 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/LRR-repeat protein 3-like (LOC100810033), transcript variant X1, mRNA	F-box/LRR-repeat protein 3-like(LOC100810033)	coding protein	psRNATarget
BT097661.1	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   *||||||||||*|||||||* targets:12   UUUUUUUUUAAACAAAAUUC   31 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22I22 unknown mRNA	NA	coding protein	psRNATarget
XM_006579874.2	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   *||||||||||||*|||||* targets:79   UUUUUUUUUAAUCUAAAUUC   98 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein NPY4-like (LOC102666919), transcript variant X1, mRNA	BTB/POZ domain-containing protein NPY4-like(LOC102666919)	coding protein	psRNATarget
BT095274.1	ncRNA:20   UAAAAAAAAUUAGUUUUAAA   1   *|||||||||||*||||||* targets:10   UUUUUUUUUAAUAAAAAUUA   29 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-25G19 unknown mRNA	NA	coding protein	psRNATarget
XM_014763231.1	ncRNA:20   UAAAAAAAAUUAGUU-UUAAA   1   |||||||||||||||-||||| targets:2695   AUUUUUUUUAAUCAACAAUUU   2715 Target Full Sequence	3.0	PREDICTED: Glycine max U11/U12 small nuclear ribonucleoprotein 48 kDa protein (LOC100803944), transcript variant X2, mRNA	U11/U12 small nuclear ribonucleoprotein 48 kDa protein(LOC100803944)	coding protein	psRNATarget
XM_014763230.1	ncRNA:20   UAAAAAAAAUUAGUU-UUAAA   1   |||||||||||||||-||||| targets:2695   AUUUUUUUUAAUCAACAAUUU   2715 Target Full Sequence	3.0	PREDICTED: Glycine max U11/U12 small nuclear ribonucleoprotein 48 kDa protein (LOC100803944), transcript variant X1, mRNA	U11/U12 small nuclear ribonucleoprotein 48 kDa protein(LOC100803944)	coding protein	psRNATarget
XM_014770210.1	ncRNA:20   UAAAAAAAAUUAGUUUU-AAA   1   =||||||||||||||||-||| targets:940   GUUUUUUUUAAUCAAAACUUU   960 Target Full Sequence	3.0	PREDICTED: Glycine max dual specificity protein phosphatase 12-like (LOC100788597), transcript variant X2, mRNA	dual specificity protein phosphatase 12-like(LOC100788597)	coding protein	psRNATarget