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BaseInfo

ncRNA ID novel_gma_miR3697
Species Glycine max
Class miRNA
Genome position Chr1:23964373-23964414 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 23 - GUAUUUGGAUAGAGAAUUUU - 42
Stem-loop(if miRNA) --      G     C   UAG
  GAUUUU UAUCU AAU   A
  |||||| ||||| |||
  UUAAGA AUAGG UUA   G
UU      G     U   UGU
Stem-loop sequence GAUUUUGUAUCUCAAUUAGAGUGUAUUUGGAUAGAGAAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772330.1
ncRNA:20   UUUUAAGAGAUAGGUUUAUG   1
  =||**|||||||||||||||
targets:2449   GAACCUCUCUAUCCAAAUAC   2468

2.0 PREDICTED: Glycine max purple acid phosphatase 17-like (LOC100813453), transcript variant X2, mRNA purple acid phosphatase 17-like(LOC100813453) coding protein psRNATarget
XM_003556592.3
ncRNA:20   UUUUAAGAGAUAGGUUUAUG   1
  =||**|||||||||||||||
targets:2589   GAACCUCUCUAUCCAAAUAC   2608

2.0 PREDICTED: Glycine max purple acid phosphatase 17-like (LOC100813453), transcript variant X1, mRNA purple acid phosphatase 17-like(LOC100813453) coding protein psRNATarget
XM_003526146.3
ncRNA:20   UUUUAAGAGAUAGGUUUAUG   1
  ||||||*||||*||||||||
targets:472   AAAAUUAUCUAGCCAAAUAC   491

2.5 PREDICTED: Glycine max polyphenol oxidase, chloroplastic-like (LOC100792012), mRNA polyphenol oxidase, chloroplastic-like(LOC100792012) coding protein psRNATarget