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BaseInfo

ncRNA ID novel_gma_miR3667
Species Glycine max
Class miRNA
Genome position Chr12:6681149-6681269 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - CUUCUUAAGUUAUUGAUUUCU - 21
Stem-loop(if miRNA) --U      -      -U      CAU    G      -       UUCGU   GGUU  U   
   GGUUAA GACUUG  GGGGAU   GGUG AGAUGC CACCAAG     GCA    AG CGAU
   |||||| ||||||  ||||||   |||| |||||| |||||||     |||    || |||G
   UUAGUU UUGAAU  UUCCUA   CCAU UUUGUG GUGGUUC     CGU    UC GUUU
UCU      A      UC      -UU    -      A       --UUU   -AUU  U   
Stem-loop sequence UGGUUAAGACUUGUGGGGAUCAUGGUGGAGAUGCCACCAAGUUCGUGCAGGUUAGUCGAUGUUUGUCUUUAUGCUUUCUUGGUGAGUGUUUUACCUUAUCCUUCUUAAGUUAUUGAUUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778539.1
ncRNA:21   UCUUUAGUUAUUGAAUUCUUC   1
  =|||=|||||||=||||||||
targets:852   GGAAGUCAAUAAUUUAAGAAG   872

2.5 PREDICTED: Glycine max uncharacterized LOC102662918 (LOC102662918), mRNA uncharacterized LOC102662918(LOC102662918) coding protein psRNATarget