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BaseInfo

ncRNA ID novel_gma_miR3662
Species Glycine max
Class miRNA
Genome position Chr11:33192440-33192554 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - CUUUUUCUGUUCUCAAAUUAG - 21
Stem-loop(if miRNA) --GAUAG   U    A        U  AAU   UUU  UUCUUC  -UUC   AC    A
       GAG AACA AGGGAGAG GC   CAG   GG      GC    GGG  UCGA U
       ||| |||| |||||||| ||   |||   ||      ||    |||  ||||
       CUC UUGU UUUUUCUC CG   GUC   UC      UG    UCC  AGCU C
GAUUAAA   -    C        -  -CC   UCU  -UUUUU  UCUC   GU    U
Stem-loop sequence GAUAGGAGUAACAAAGGGAGAGUGCAAUCAGUUUGGUUCUUCGCUUCGGGACUCGAAUCUUCGAUGCCUCUCUGUUUUUUCUUCUCUGCCGCCUCUUUUUCUGUUCUCAAAUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591983.2
ncRNA:21   GAUUAAACUCUUGUCUUUUUC   1
  |*|||||||*||||||||||*
targets:1544   CAAAUUUGAAAACAGAAAAAA   1564

2.5 PREDICTED: Glycine max ENHANCER OF AG-4 protein 2-like (LOC100800279), transcript variant X4, mRNA ENHANCER OF AG-4 protein 2-like(LOC100800279) coding protein psRNATarget
XM_006590736.2
ncRNA:21   GAUUAAACUCUUGUCUUUUUC   1
  |*|||||||*||||||||||*
targets:1588   CAAAUUUGAAAACAGAAAAAA   1608

2.5 PREDICTED: Glycine max ENHANCER OF AG-4 protein 2-like (LOC100810034), transcript variant X5, mRNA ENHANCER OF AG-4 protein 2-like(LOC100810034) coding protein psRNATarget