ncRNA ID | novel_gma_miR3662 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:33192440-33192554 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUUUUUCUGUUCUCAAAUUAG - 21 |
Stem-loop(if miRNA) |
--GAUAG   U    A        U  AAU   UUU  UUCUUC  -UUC   AC    A        GAG AACA AGGGAGAG GC   CAG   GG      GC    GGG  UCGA U        ||| |||| |||||||| ||   |||   ||      ||    |||  ||||        CUC UUGU UUUUUCUC CG   GUC   UC      UG    UCC  AGCU C GAUUAAA   -    C        -  -CC   UCU  -UUUUU  UCUC   GU    U |
Stem-loop sequence | GAUAGGAGUAACAAAGGGAGAGUGCAAUCAGUUUGGUUCUUCGCUUCGGGACUCGAAUCUUCGAUGCCUCUCUGUUUUUUCUUCUCUGCCGCCUCUUUUUCUGUUCUCAAAUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006591983.2 |
|
2.5 | PREDICTED: Glycine max ENHANCER OF AG-4 protein 2-like (LOC100800279), transcript variant X4, mRNA | ENHANCER OF AG-4 protein 2-like(LOC100800279) | coding protein | psRNATarget | |||||||||
XM_006590736.2 |
|
2.5 | PREDICTED: Glycine max ENHANCER OF AG-4 protein 2-like (LOC100810034), transcript variant X5, mRNA | ENHANCER OF AG-4 protein 2-like(LOC100810034) | coding protein | psRNATarget |