ncRNA ID | ahy-miR3515 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AAUGUAGAAAAUGAACGGUAU - NA |
Stem-loop(if miRNA) |
GGAGGAGAA --- C AU CUCAUU UC - U A AU UCAAUA AUGUUAUUU UAC UUCAUUUUCUAUA CUCUGCACCU CUUUUAUG UA GAUAA GGAAAAA A |||||| ||||||||| ||| ||||||||||||| |||||||||| |||||||| || ||||| ||||||| U AGUUGU UACAAUAAA AUG AAGUAAAAGAUGU GAGAUGUGGA GAAAAUAC GU UUAUU UCUUUUU A -------AG AGU U GC AAAAAU GU U U A AA |
Stem-loop sequence | GGAGGAGAAUCAAUAAUGUUAUUUCUACAUUUCAUUUUCUAUACUCAUUCUCUGCACCUUCCUUUUAUGUAUGAUAAAGGAAAAAAUAUAAAUUUUUCUAUUAUUUUGUCAUAAAAGUGAGGUGUAGAGUAAAAAUGUAGAAAAUGAACGGUAUAAAUAACAUUGAUGUUGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01025892.1 |
|
3.0 | TSA: Arachis hypogaea Unigene25909 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01050751.1 |
|
3.0 | TSA: Arachis hypogaea Unigene50789 mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |