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BaseInfo

ncRNA ID ahy-miR3515
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AAUGUAGAAAAUGAACGGUAU - NA
Stem-loop(if miRNA) GGAGGAGAA      ---         C   AU             CUCAUU          UC        -  U     A       AU
         UCAAUA   AUGUUAUUU UAC  UUCAUUUUCUAUA      CUCUGCACCU  CUUUUAUG UA GAUAA GGAAAAA  A
         ||||||   ||||||||| |||  |||||||||||||      ||||||||||  |||||||| || ||||| |||||||  U
         AGUUGU   UACAAUAAA AUG  AAGUAAAAGAUGU      GAGAUGUGGA  GAAAAUAC GU UUAUU UCUUUUU  A
-------AG      AGU         U   GC             AAAAAU          GU        U  U     A       AA
Stem-loop sequence GGAGGAGAAUCAAUAAUGUUAUUUCUACAUUUCAUUUUCUAUACUCAUUCUCUGCACCUUCCUUUUAUGUAUGAUAAAGGAAAAAAUAUAAAUUUUUCUAUUAUUUUGUCAUAAAAGUGAGGUGUAGAGUAAAAAUGUAGAAAAUGAACGGUAUAAAUAACAUUGAUGUUGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01025892.1
ncRNA:21   UAUGGCAAGUAAAAGAUGUAA   1
  |*|==||*|||||||||||||
targets:1623   ACAUUGUGCAUUUUCUACAUU   1643

3.0 TSA: Arachis hypogaea Unigene25909 mRNA sequence NA coding protein psRNATarget
GAER01050751.1
ncRNA:21   UAUGGCAAGUAAAAGAUGUAA   1
  |*|==||*|||||||||||||
targets:391   ACAUUGUGCAUUUUCUACAUU   411

3.0 TSA: Arachis hypogaea Unigene50789 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).