ncRNA ID | novel_gma_miR3654 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:26380771-26380877 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUCUGUAUAACUCAUACGGA - 20 |
Stem-loop(if miRNA) |
--        A               G     C     AACUC   C     A   AUCUGUAU ACUCAUACGGAUCAA UUGAU CGUAU     AUA GGAUC A   |||||||| ||||||||||||||| ||||| |||||     ||| ||||| C   UAGACGUA UGAGUAUGUCUAGUU AACUA GCAUA     UAU CCUAG U UC        A               G     A     CUCAA   U     A |
Stem-loop sequence | AUCUGUAUAACUCAUACGGAUCAAGUUGAUCCGUAUAACUCAUACGGAUCAACUAGAUCCUUAUAACUCAUACGAAUCAAGUUGAUCUGUAUGAGUAAUGCAGAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768839.1 |
|
3.0 | PREDICTED: Glycine max protein TSS-like (LOC100784117), transcript variant X2, mRNA | protein TSS-like(LOC100784117) | coding protein | psRNATarget | |||||||||
XM_014768838.1 |
|
3.0 | PREDICTED: Glycine max protein TSS-like (LOC100784117), transcript variant X1, mRNA | protein TSS-like(LOC100784117) | coding protein | psRNATarget | |||||||||
XM_006598840.2 |
|
3.0 | PREDICTED: Glycine max protein TSS-like (LOC100784117), transcript variant X3, mRNA | protein TSS-like(LOC100784117) | coding protein | psRNATarget |