ncRNA ID | novel_gma_miR3651 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:45526809-45526886 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 59 - AUAUUCUUGAUCUGUAAUUU - 78 |
Stem-loop(if miRNA) |
--A      UGAUC   AAUUUU   -U         --  G    UAUUCU     UGU      UUC  ACCUUGUAG  AG A    ||||||     |||      |||  |||||||||  ||    AUAGGA     ACA      AAG  UGGGGCAUU  UC G GUC      ---UC   GAAUUU   CC         UG  A |
Stem-loop sequence | AUAUUCUUGAUCUGUAAUUUUUUCUACCUUGUAGAGGAGACUGUUUACGGGGUCCGAAUUUAAGACACUAGGAUACUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774204.1 |
|
1.0 | PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100820332), mRNA | probable polygalacturonase At3g15720(LOC100820332) | coding protein | psRNATarget | |||||||||
XM_014774203.1 |
|
2.5 | PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100818729), mRNA | probable polygalacturonase At3g15720(LOC100818729) | coding protein | psRNATarget | |||||||||
XM_003546460.3 |
|
2.5 | PREDICTED: Glycine max tubulin--tyrosine ligase-like protein 12 (LOC100809212), mRNA | tubulin--tyrosine ligase-like protein 12(LOC100809212) | coding protein | psRNATarget |