Search result

BaseInfo

ncRNA ID	novel_gma_miR3649
Species	Glycine max
Class	miRNA
Genome position	Chr11:1032730-1032801 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	53 - UCUGUGGGAAAAAAAAAAAA - 72
Stem-loop(if miRNA)	--     A         C -UU    CCUCCUUAUCUUU   U   UUUUU UUUUCCCAU G   AUGG             GUC U   ||||| ||||||||| |   ||||             |||   AAAAA AAAAGGGUG C   UACC             UAG C AA     A         U UUU    -------------   G
Stem-loop sequence	UUUUUAUUUUCCCAUCGUUAUGGCCUCCUUAUCUUUGUCUUCGGAUCCAUUUUCUGUGGGAAAAAAAAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600602.2	ncRNA:20   AAAAAAAAAAAAGGGUGUCU   1   |||||||||||||*|||||= targets:212   UUUUUUUUUUUUCACACAGG   231 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100800030 (LOC100800030), transcript variant X2, mRNA	uncharacterized LOC100800030(LOC100800030)	coding protein	psRNATarget
XM_003540408.3	ncRNA:20   AAAAAAAAAAAAGGGUGUCU   1   |||||||||||||||*|||* targets:2076   UUUUUUUUUUUUCCCUCAGC   2095 Target Full Sequence	2.5	PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 6-like (LOC100788118), mRNA	plant intracellular Ras-group-related LRR protein 6-like(LOC100788118)	coding protein	psRNATarget
XM_006574617.2	ncRNA:20   AAAAAAAAAAAAGGGUGU-CU   1   ||||||||||||||||||-|| targets:1   UUUUUUUUUUUUCCCACACGA   21 Target Full Sequence	3.0	PREDICTED: Glycine max calpain-15 (LOC100784874), transcript variant X2, mRNA	calpain-15(LOC100784874)	coding protein	psRNATarget