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BaseInfo

ncRNA ID	novel_gma_miR3648
Species	Glycine max
Class	miRNA
Genome position	Chr1:35080394-35080476 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - AUGAAACUCUAAUUUUCAUU - 20
Stem-loop(if miRNA)	---UCAAAA          A   -UAU      UU       A          UGGAGUUUCA CUC    GUUGGU  UAAUAAG G          |||||||||| |||    ||||||  |||||||          AUCUCAAAGU GAG    UAACCA  AUUAUUU U UUACUUUUA          A   UUAU      -C       C
Stem-loop sequence	UCAAAAUGGAGUUUCAACUCUAUGUUGGUUUUAAUAAGAGUCUUUAUUACACCAAUUAUUGAGAUGAAACUCUAAUUUUCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767498.1	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   |||*|=|||||||||||||| targets:654   AAUCAGAAUUAGAGUUUCAU   673 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102659579 (LOC102659579), mRNA	uncharacterized LOC102659579(LOC102659579)	coding protein	psRNATarget
XM_006573286.2	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   *||*|=|||||||||||||| targets:2094   UAUCAGAAUUAGAGUUUCAU   2113 Target Full Sequence	2.0	PREDICTED: Glycine max lactosylceramide 4-alpha-galactosyltransferase-like (LOC100781975), mRNA	lactosylceramide 4-alpha-galactosyltransferase-like(LOC100781975)	coding protein	psRNATarget
XM_003554918.3	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   |||*||||||=||||||||| targets:1546   AAUCAAAAUUGGAGUUUCAU   1565 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100811822 (LOC100811822), mRNA	uncharacterized LOC100811822(LOC100811822)	coding protein	psRNATarget
XM_014768543.1	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   |||*|||||||||||||=|| targets:2137   AAUUAAAAUUAGAGUUUUAU   2156 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 49-like (LOC100787316), mRNA	protein DETOXIFICATION 49-like(LOC100787316)	coding protein	psRNATarget
XM_003528141.3	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   =||*|||||||||||||=|| targets:548   GAUAAAAAUUAGAGUUUUAU   567 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor ILI4-like (LOC100810266), mRNA	transcription factor ILI4-like(LOC100810266)	coding protein	psRNATarget
XM_003555401.3	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   |||*|||||||||*|||||| targets:896   AAUCAAAAUUAGAAUUUCAU   915 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor WER-like (LOC100780809), mRNA	transcription factor WER-like(LOC100780809)	coding protein	psRNATarget
XM_003535467.3	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   |||*|||||||||*|||||| targets:907   AAUCAAAAUUAGAAUUUCAU   926 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor TT2-like (LOC100794570), mRNA	transcription factor TT2-like(LOC100794570)	coding protein	psRNATarget
XM_014768463.1	ncRNA:20   UUACUUUUAAUCUCAAAGUA   1   *||*|=|||||||||||||* targets:1777   UAUCAGAAUUAGAGUUUCAG   1796 Target Full Sequence	3.0	PREDICTED: Glycine max ethylene-responsive transcription factor ABR1-like (LOC100817436), mRNA	ethylene-responsive transcription factor ABR1-like(LOC100817436)	coding protein	psRNATarget