ncRNA ID | novel_gma_miR3647 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:39541696-39541909 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 19 |
Mature sequence(if miRNA) | 196 - UAUUGUCGGUUCAAAACUG - 214 |
Stem-loop(if miRNA) |
--AA        CU            ACAU           -   ---UUCUU         ---A                      C UU       UAACUACCCC     CU     UUUGAACC  UAAUAAACACAU    GUAUUUAAAAU AAU        UUAACAUAG    AAUUUUUUUUAAUUGUUACUAU G  UAAGUUU          UUCUU  C     ||||||||  ||||||||||||    ||||||||||| |||        |||||||||    |||||||||||||||||||||| |  |||||||          |||||  U     AAACUUGG  GUUAUUUGUGUG    CGUGAAUUUUA UUG        AAUUGUAUC    UUAGAAAAAAUUAACGGUGAUA C  AUUCAAA          AAGAA  C GUCA        CU            ----           A   UAUAUAUC         ACUA                      A -U       -------UAA     AA |
Stem-loop sequence | AAUUUGAACCCUUAAUAAACACAUACAUGUAUUUAAAAUAAUUUCUUUUAACAUAGAAAUUUUUUUUAAUUGUUACUAUCGUUUAAGUUUUAACUACCCCUUCUUCUCUCAAAAGAAAAUAAACUUAUCAAUAGUGGCAAUUAAAAAAGAUUAUCACUAUGUUAACUAUAUAUGUUAAUUUUAAGUGCGUGUGUUUAUUGUCGGUUCAAAACUG |