ncRNA ID | novel_gma_miR3642 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:1941220-1941304 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 66 - UUCGAAUCGGAUUGGUAACA - 85 |
Stem-loop(if miRNA) |
--         GA       CAA G           GUAG   U   UUCGAAUCG  UUGGUAA   G AAUUUAUGUGU    GUG G   |||||||||  |||||||   | |||||||||||    |||   AAGUUUAGU  GAUCGUU   U UUGAAUAUAUA    UAU U UC         UC       -CG G           --AA   G |
Stem-loop sequence | UUCGAAUCGGAUUGGUAACAAGGAAUUUAUGUGUGUAGGUGUGUGUAUAAAUAUAUAAGUUGUGCUUGCUAGCUUGAUUUGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006601870.2 |
|
2.5 | PREDICTED: Glycine max small subunit processome component 20 homolog (LOC100811612), mRNA | small subunit processome component 20 homolog(LOC100811612) | coding protein | psRNATarget |