ncRNA ID | novel_gma_miR3640 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:28421560-28421638 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 60 - UCCACUAUUGACAACACUGG - 79 |
Stem-loop(if miRNA) |
--          A    -A    CUUCAAGUUGACCCAGA   UCCACUAUUG CAAC  CUGG                 U   |||||||||| ||||  ||||   AGGUGGUAGU GUUG  CGCG                 G AG          A    UA    UUCUCUCAGCGAUUACU |
Stem-loop sequence | UCCACUAUUGACAACACUGGCUUCAAGUUGACCCAGAUGUCAUUAGCGACUCUCUUGCGCAUGUUGAUGAUGGUGGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587357.2 |
|
2.5 | PREDICTED: Glycine max putative GEM-like protein 8 (LOC100787509), transcript variant X2, mRNA | putative GEM-like protein 8(LOC100787509) | coding protein | psRNATarget | |||||||||
XM_003534050.3 |
|
2.5 | PREDICTED: Glycine max putative GEM-like protein 8 (LOC100787509), transcript variant X1, mRNA | putative GEM-like protein 8(LOC100787509) | coding protein | psRNATarget |