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BaseInfo

ncRNA ID novel_gma_miR3640
Species Glycine max
Class miRNA
Genome position Chr9:28421560-28421638 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 60 - UCCACUAUUGACAACACUGG - 79
Stem-loop(if miRNA) --          A    -A    CUUCAAGUUGACCCAGA
  UCCACUAUUG CAAC  CUGG                 U
  |||||||||| ||||  ||||
  AGGUGGUAGU GUUG  CGCG                 G
AG          A    UA    UUCUCUCAGCGAUUACU
Stem-loop sequence UCCACUAUUGACAACACUGGCUUCAAGUUGACCCAGAUGUCAUUAGCGACUCUCUUGCGCAUGUUGAUGAUGGUGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587357.2
ncRNA:20   GGUCACAACAGUUAUCACCU   1
  =||||||||||*|||||||=
targets:1049   UCAGUGUUGUCCAUAGUGGG   1068

2.5 PREDICTED: Glycine max putative GEM-like protein 8 (LOC100787509), transcript variant X2, mRNA putative GEM-like protein 8(LOC100787509) coding protein psRNATarget
XM_003534050.3
ncRNA:20   GGUCACAACAGUUAUCACCU   1
  =||||||||||*|||||||=
targets:1058   UCAGUGUUGUCCAUAGUGGG   1077

2.5 PREDICTED: Glycine max putative GEM-like protein 8 (LOC100787509), transcript variant X1, mRNA putative GEM-like protein 8(LOC100787509) coding protein psRNATarget