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BaseInfo

ncRNA ID novel_gma_miR3631
Species Glycine max
Class miRNA
Genome position Chr8:7245432-7245482 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - UUUGGAUAGAGCUAGAAAAU - 20
Stem-loop(if miRNA) --    G     -  G    U  UUG
  UUUC AGUUU AU CAAG GA   A
  |||| ||||| || |||| ||
  AAAG UCGAG UA GUUU CU   U
UA    A     A  G    U  UUU
Stem-loop sequence UUUCGAGUUUAUGCAAGUGAUUGAUUUUUCUUUUGGAUAGAGCUAGAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581534.2
ncRNA:20   UAA-AAGAUCGAGAUAGGUUU   1
  |||-|||*|||||||||||||
targets:1440   AUUAUUCAAGCUCUAUCCAAA   1460

3.0 PREDICTED: Glycine max protein translocase subunit SECA2, chloroplastic (LOC100793437), transcript variant X2, mRNA protein translocase subunit SECA2, chloroplastic(LOC100793437) coding protein psRNATarget
XM_006581533.2
ncRNA:20   UAA-AAGAUCGAGAUAGGUUU   1
  |||-|||*|||||||||||||
targets:1440   AUUAUUCAAGCUCUAUCCAAA   1460

3.0 PREDICTED: Glycine max protein translocase subunit SECA2, chloroplastic (LOC100793437), transcript variant X1, mRNA protein translocase subunit SECA2, chloroplastic(LOC100793437) coding protein psRNATarget
XM_003527902.3
ncRNA:20   UAA-AAGAUCGAGAUAGGUUU   1
  |||-|||*|||||||||||||
targets:3660   AUUAUUCAAGCUCUAUCCAAA   3680

3.0 PREDICTED: Glycine max protein translocase subunit SECA2, chloroplastic (LOC100793437), transcript variant X3, mRNA protein translocase subunit SECA2, chloroplastic(LOC100793437) coding protein psRNATarget