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BaseInfo

ncRNA ID novel_gma_miR3625
Species Glycine max
Class miRNA
Genome position Chr8:44624820-44624893 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - AUAUGUUAGUAAUUGAACUUU - 21
Stem-loop(if miRNA) AGUUA      --      U     UACAAAUUUACA
     UCAAUU  UGAUAU UGUAU            A
     ||||||  |||||| |||||
     AGUUAA  AUUGUA ACGUA            C
UUUCA      UG      U     CAUACAUUUUCA
Stem-loop sequence AGUUAUCAAUUUGAUAUUUGUAUUACAAAUUUACAACACUUUUACAUACAUGCAUAUGUUAGUAAUUGAACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594322.2
ncRNA:21   UUUCAAGUUAAUGAUUGUAUA   1
  *|||||=|||||||*||||||
targets:1860   CAAGUUUAAUUACUUACAUAU   1880

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X3, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget
XM_006594323.2
ncRNA:21   UUUCAAGUUAAUGAUUGUAUA   1
  *|||||=|||||||*||||||
targets:1833   CAAGUUUAAUUACUUACAUAU   1853

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X2, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget
XM_003541539.3
ncRNA:21   UUUCAAGUUAAUGAUUGUAUA   1
  *|||||=|||||||*||||||
targets:1860   CAAGUUUAAUUACUUACAUAU   1880

2.5 PREDICTED: Glycine max putative disease resistance protein At3g14460 (LOC100783712), transcript variant X1, mRNA putative disease resistance protein At3g14460(LOC100783712) coding protein psRNATarget