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BaseInfo

ncRNA ID novel_gma_miR3620
Species Glycine max
Class miRNA
Genome position Chr7:5145510-5145666 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 138 - UCUUUCGUUUUCUACAUCGA - 157
Stem-loop(if miRNA) UCUUUCGUUUUCUACAUCGACUGUUUUUAAAUCUUUC          UG  CU    ------  U   UCGGAGCACCCUUUGGAAUUGCAUUUGUCCU
                                     CCUUUGUUUU  GC  UUCU      AA GGU                               G
                                     ||||||||||  ||  ||||      || |||
                                     GGAAACAAAA  GA  UCGU      GG GUC                               U
-----------------------------------GA          -C  --    UAUCCU  -   UACUUAUUUAUGGCUUUUAAUUUACGGUCUU
Stem-loop sequence UCUUUCGUUUUCUACAUCGACUGUUUUUAAAUCUUUCCCUUUGUUUUUGGCCUUUCUAAUGGUUCGGAGCACCCUUUGGAAUUGCAUUUGUCCUGUUUCUGGCAUUUAAUUUUCGGUAUUUAUUCAUCUGGGUCCUAUUGCUAGCAAAACAAAGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538664.3
ncRNA:20   AGCUACAUCUUUUGCUUUCU   1
  |**|*|||||||||||||||
targets:1096   UACAAGUAGAAAACGAAAGA   1115

3.0 PREDICTED: Glycine max molybdenum cofactor sulfurase-like (LOC100796713), mRNA molybdenum cofactor sulfurase-like(LOC100796713) coding protein psRNATarget