ncRNA ID | novel_gma_miR3620 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:5145510-5145666 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 138 - UCUUUCGUUUUCUACAUCGA - 157 |
Stem-loop(if miRNA) |
UCUUUCGUUUUCUACAUCGACUGUUUUUAAAUCUUUC          UG  CU    ------  U   UCGGAGCACCCUUUGGAAUUGCAUUUGUCCU                                      CCUUUGUUUU  GC  UUCU      AA GGU                               G                                      ||||||||||  ||  ||||      || |||                                      GGAAACAAAA  GA  UCGU      GG GUC                               U -----------------------------------GA          -C  --    UAUCCU  -   UACUUAUUUAUGGCUUUUAAUUUACGGUCUU |
Stem-loop sequence | UCUUUCGUUUUCUACAUCGACUGUUUUUAAAUCUUUCCCUUUGUUUUUGGCCUUUCUAAUGGUUCGGAGCACCCUUUGGAAUUGCAUUUGUCCUGUUUCUGGCAUUUAAUUUUCGGUAUUUAUUCAUCUGGGUCCUAUUGCUAGCAAAACAAAGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003538664.3 |
|
3.0 | PREDICTED: Glycine max molybdenum cofactor sulfurase-like (LOC100796713), mRNA | molybdenum cofactor sulfurase-like(LOC100796713) | coding protein | psRNATarget |