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BaseInfo

ncRNA ID	novel_gma_miR3618
Species	Glycine max
Class	miRNA
Genome position	Chr7:15229460-15229568 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - CAAUUUUGAUUGGAGAACAG - 20
Stem-loop(if miRNA)	--            U    AAAG         UACAAUU      AUAAA     GCA   GUUCUCUAAUCA AAUU    UUUUACCUC       UGCUUA     AGUUU   C   |||||||||||| ||||    |||||||||       ||||||     |||||   CAAGAGGUUAGU UUAA    AAAGUGGAG       AUGAGU     UUAGG   U GA            U    CAAA         ---CUAU      ----A     AAA
Stem-loop sequence	GUUCUCUAAUCAUAAUUAAAGUUUUACCUCUACAAUUUGCUUAAUAAAAGUUUGCACUAAAGGAUUAUGAGUAUAUCGAGGUGAAAAAACAAUUUUGAUUGGAGAACAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006585935.2	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =||||||||||||||||||| targets:429   UUGUUCUCCAAUCAAAAUUG   448 Target Full Sequence	0.0	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_006585934.2	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =||||||||||||||||||| targets:429   UUGUUCUCCAAUCAAAAUUG   448 Target Full Sequence	0.0	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_003554034.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =|||||||||||=||||||| targets:2012   UUGUUCUCCAAUUAAAAUUG   2031 Target Full Sequence	1.5	PREDICTED: Glycine max ABSCISIC ACID-INSENSITIVE 5-like protein 2 (LOC100783666), mRNA	ABSCISIC ACID-INSENSITIVE 5-like protein 2(LOC100783666)	coding protein	psRNATarget
XM_006585935.2	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   |||||=||||||=||||||| targets:231   CUGUUUUCCAAUUAAAAUUG   250 Target Full Sequence	2.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_006585934.2	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   |||||=||||||=||||||| targets:231   CUGUUUUCCAAUUAAAAUUG   250 Target Full Sequence	2.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_003522847.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   |||||=||||||=||||||| targets:2207   CUGUUUUCCAAUUAAAAUUG   2226 Target Full Sequence	2.5	PREDICTED: Glycine max probable protein arginine N-methyltransferase 3 (LOC100781879), mRNA	probable protein arginine N-methyltransferase 3(LOC100781879)	coding protein	psRNATarget
XM_006588203.2	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =||||=||||||||=||||| targets:248   UUGUUUUCCAAUCAGAAUUG   267 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized sugar kinase slr0537-like (LOC100792076), mRNA	uncharacterized sugar kinase slr0537-like(LOC100792076)	coding protein	psRNATarget
XM_003520274.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =||||=||||||=||||||| targets:1929   UUGUUUUCCAAUUAAAAUUG   1948 Target Full Sequence	2.5	PREDICTED: Glycine max ABSCISIC ACID-INSENSITIVE 5-like protein 2 (LOC100819965), mRNA	ABSCISIC ACID-INSENSITIVE 5-like protein 2(LOC100819965)	coding protein	psRNATarget
XM_003517602.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   =||||=|=|||||||||||| targets:3091   UUGUUUUUCAAUCAAAAUUG   3110 Target Full Sequence	2.5	PREDICTED: Glycine max disease resistance protein RPM1-like (LOC100805346), mRNA	disease resistance protein RPM1-like(LOC100805346)	coding protein	psRNATarget
XM_014761957.1	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   *||*||||*||||||||||| targets:682   AUGGUCUCAAAUCAAAAUUG   701 Target Full Sequence	2.5	PREDICTED: Glycine max U3 small nucleolar RNA-associated protein 25 (LOC100810500), transcript variant X2, mRNA	U3 small nucleolar RNA-associated protein 25(LOC100810500)	coding protein	psRNATarget
XM_003533679.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   *||*||||*||||||||||| targets:702   AUGGUCUCAAAUCAAAAUUG   721 Target Full Sequence	2.5	PREDICTED: Glycine max U3 small nucleolar RNA-associated protein 25 (LOC100810500), transcript variant X1, mRNA	U3 small nucleolar RNA-associated protein 25(LOC100810500)	coding protein	psRNATarget
XM_014769990.1	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   ||*|||*||||||||||||* targets:232   CUUUUCCCCAAUCAAAAUUC   251 Target Full Sequence	3.0	PREDICTED: Glycine max protein NAR1-like (LOC100806757), transcript variant X2, mRNA	protein NAR1-like(LOC100806757)	coding protein	psRNATarget
XM_003549451.3	ncRNA:20   GACAAGAGGUUAGUUUUAAC   1   ||*|||*||||||||||||* targets:232   CUUUUCCCCAAUCAAAAUUC   251 Target Full Sequence	3.0	PREDICTED: Glycine max protein NAR1-like (LOC100806757), transcript variant X1, mRNA	protein NAR1-like(LOC100806757)	coding protein	psRNATarget