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BaseInfo

ncRNA ID	novel_gma_miR3613
Species	Glycine max
Class	miRNA
Genome position	Chr6:40396209-40396359 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	21
Mature sequence(if miRNA)	1 - UUGAAUAAAAGCUGGGAAAUU - 21
Stem-loop(if miRNA)	--       AA   U      U    UGCUACG        UACC   UAACUUUUUAAACCAGCAGGUUCUACACU   UUGAAUA  AGC GGGAAA UGAU       UAAUUUGU    UUU                             G   |||||||  ||| |||||| ||||       ||||||||    |||   AAUUUGU  UCG UCCUUU ACUG       GUUAAACA    AAG                             U UG       -G   -      C    UUAUACU        -UUA   UAAAUUUAUAAAGUCAGAGUUGUUUUGAU
Stem-loop sequence	UUGAAUAAAAGCUGGGAAAUUGAUUGCUACGUAAUUUGUUACCUUUUAACUUUUUAAACCAGCAGGUUCUACACUGUUAGUUUUGUUGAGACUGAAAUAUUUAAAUGAAAUUACAAAUUGUCAUAUUGUCACUUUCCUGCUGUGUUUAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768973.1	ncRNA:21   UUAAAGGGUCGAAAAUAAGUU   1   |||||||*|||||||=||||| targets:1248   AAUUUCCGAGCUUUUGUUCAA   1268 Target Full Sequence	2.5	PREDICTED: Glycine max protein S-acyltransferase 8 (LOC100795934), transcript variant X3, mRNA	protein S-acyltransferase 8(LOC100795934)	coding protein	psRNATarget
AK244124.1	ncRNA:21   UUAAAGGGUCGAAAAUAAGUU   1   |||||||*|||||||=||||| targets:1238   AAUUUCCGAGCUUUUGUUCAA   1258 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-02-C14	NA	coding protein	psRNATarget
XM_003548048.3	ncRNA:21   UUAAAGGGUCGAAAAUAAGUU   1   |||||||*|||||||=||||| targets:1349   AAUUUCCGAGCUUUUGUUCAA   1369 Target Full Sequence	2.5	PREDICTED: Glycine max protein S-acyltransferase 8 (LOC100795934), transcript variant X1, mRNA	protein S-acyltransferase 8(LOC100795934)	coding protein	psRNATarget
XM_006599416.2	ncRNA:21   UUAAAGGGUCGAAAAUAAGUU   1   |||||||*|||||||=||||| targets:1352   AAUUUCCGAGCUUUUGUUCAA   1372 Target Full Sequence	2.5	PREDICTED: Glycine max protein S-acyltransferase 8 (LOC100795934), transcript variant X2, mRNA	protein S-acyltransferase 8(LOC100795934)	coding protein	psRNATarget
XM_003518507.3	ncRNA:21   UUAAAGGGUCGAAAAUAAGUU   1   |||||||*|||||||=||||| targets:1347   AAUUUCCGAGCUUUUGUUCAA   1367 Target Full Sequence	2.5	PREDICTED: Glycine max protein S-acyltransferase 8-like (LOC100818705), mRNA	protein S-acyltransferase 8-like(LOC100818705)	coding protein	psRNATarget