Search result

BaseInfo

ncRNA ID novel_gma_miR3608
Species Glycine max
Class miRNA
Genome position Chr6:9459025-9459068 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 25 - GUAUUUUGACGUUUGACUGG - 44
Stem-loop(if miRNA) --C   UUU     G       A
   GUU   GCGUU AAAGUGC U
   |||   ||||| |||||||
   CAG   UGCAG UUUUAUG U
GGU   -UU     -       U
Stem-loop sequence CGUUUUUGCGUUGAAAGUGCAUUUGUAUUUUGACGUUUGACUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544055.3
ncRNA:20   GGUCAGUUUGCAGUUUUAUG   1
  *=|*|||||||||||||||=
targets:1850   AUAAUCAAACGUCAAAAUAU   1869

3.0 PREDICTED: Glycine max probable zinc metalloprotease EGY2, chloroplastic (LOC100816506), mRNA probable zinc metalloprotease EGY2, chloroplastic(LOC100816506) coding protein psRNATarget