ncRNA ID | novel_gma_miR3599 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:10145339-10145437 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGCGGCUGCGGACUGCAAUUU - 21 |
Stem-loop(if miRNA) |
--         AAU      A     U G         CG UUGCAGU   UC   AUUGCGGUU   GCGGCC CAAUU C AUCGCAAUG  G       GAU  A   |||||||||   |||||| ||||| | |||||||||  |       |||  A   UAACGUCAG   CGUCGG GUUAA G UGGUGUUGC  C       CUA  A UU         --G      C     C A         AU ------U   UA |
Stem-loop sequence | AUUGCGGUUAAUGCGGCCACAAUUUCGAUCGCAAUGCGGUUGCAGUGAUUCAAAAUAUCUCUACGUUGUGGUAGCAAUUGCGGCUGCGGACUGCAAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774549.1 |
|
1.5 | PREDICTED: Glycine max TMV resistance protein N-like (LOC100808685), mRNA | TMV resistance protein N-like(LOC100808685) | coding protein | psRNATarget |