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BaseInfo

ncRNA ID novel_gma_miR3599
Species Glycine max
Class miRNA
Genome position Chr6:10145339-10145437 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - UGCGGCUGCGGACUGCAAUUU - 21
Stem-loop(if miRNA) --         AAU      A     U G         CG UUGCAGU   UC
  AUUGCGGUU   GCGGCC CAAUU C AUCGCAAUG  G       GAU  A
  |||||||||   |||||| ||||| | |||||||||  |       |||  A
  UAACGUCAG   CGUCGG GUUAA G UGGUGUUGC  C       CUA  A
UU         --G      C     C A         AU ------U   UA
Stem-loop sequence AUUGCGGUUAAUGCGGCCACAAUUUCGAUCGCAAUGCGGUUGCAGUGAUUCAAAAUAUCUCUACGUUGUGGUAGCAAUUGCGGCUGCGGACUGCAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774549.1
ncRNA:21   UUUAACGUCAGGCGUCGGCGU   1
  |||||||||||||||*|||||
targets:794   AAAUUGCAGUCCGCAACCGCA   814

1.5 PREDICTED: Glycine max TMV resistance protein N-like (LOC100808685), mRNA TMV resistance protein N-like(LOC100808685) coding protein psRNATarget