Search result

BaseInfo

ncRNA ID novel_gma_miR3598
Species Glycine max
Class miRNA
Genome position Chr6:11903038-11903091 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - AUUUGUUGAAAGGACAAUUUU - 21
Stem-loop(if miRNA) --                UCCAAGGAC
  AGUUGUCCUUUUAACA         G
  ||||||||||||||||
  UUAACAGGAAAGUUGU         A
UU                UUAUAUAAA
Stem-loop sequence AGUUGUCCUUUUAACAUCCAAGGACGAAAAUAUAUUUGUUGAAAGGACAAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549817.3
ncRNA:21   UUUUAACAGGAAAGUUGUUUA   1
  |*|=||*|||||||||||||*
targets:2020   AUAGUUUUCCUUUCAACAAAG   2040

3.0 PREDICTED: Glycine max protein HOTHEAD-like (LOC100780028), mRNA protein HOTHEAD-like(LOC100780028) coding protein psRNATarget