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BaseInfo

ncRNA ID novel_gma_miR3596
Species Glycine max
Class miRNA
Genome position Chr9:39235654-39235769 [-]
Reference genome Glycine_max_v2.0
Source SRR1451675
Length 21
Mature sequence(if miRNA) 1 - UAUGGUUCGGGCAUUGACUUC - 21
Stem-loop(if miRNA) --      - AA  C           ---AUAA  UACUUAGGGGGUGCAUGUUUUUCUU
  AGUCAA G  CG ACCAUAUAUAU       UA                         C
  |||||| |  || |||||||||||       ||
  UCAGUU C  GC UGGUAUGUGUA       CC                         U
CU      A GG  U           AAAAGUA  UCACGAUCGAUUAGAACGUUACAUC
Stem-loop sequence AGUCAAGAACGCACCAUAUAUAUAUAAUAUACUUAGGGGGUGCAUGUUUUUCUUCUCUACAUUGCAAGAUUAGCUAGCACUCCAUGAAAAAUGUGUAUGGUUCGGGCAUUGACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586444.1
ncRNA:21   CUUCAGUUACGGGCUUGGUAU   1
  |=|||||||||||||||||**
targets:583   GGAGUCAAUGCCCGAACCAAU   603

2.5 PREDICTED: Glycine max uncharacterized LOC102669463 (LOC102669463), mRNA uncharacterized LOC102669463(LOC102669463) coding protein psRNATarget